Oryzias latipes (Japanese medaka): 101157817
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Entry
101157817 CDS
T02443
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101157817 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101157817 (bms1)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
GTPase
101157817 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
MMR_HSR1
AAA_22
RNA_helicase
AAA
AAA_16
nSTAND3
AAA_18
Motif
Other DBs
NCBI-GeneID:
101157817
NCBI-ProteinID:
XP_023805268
LinkDB
All DBs
Position
19:23404704..23417179
Genome browser
AA seq
1189 aa
AA seq
DB search
MEEKVQKQRKHQQKHSGPKAQKKKLRKQAGAADGDERKRNPKAFAVQSAVRMAKTFHRAQ
DIKAKKHHIPVVDRTPLEPPPVVIVVMGPPKVGKSTLIRCLIKNFTRQKLGDICGPVTIV
SGKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMG
VLTHLDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFISV
MKFRPLVWQTSHPYVLVDRMEDLTDPEKIRTEPKCDRTVSLYGYLRGTHLKNKGQVHVPG
VGDFEVSDVDFLPDPCPLPDAQKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDLPASHV
HQQQEEMRPTTELVQSLIDTHATLDAKMAASKVSLFSGSGTMGPEGAGEQSGGQDGLQEE
SVWDSNTNRQRRRVLFPGDEDDGSASSSEDEEEEEEEESDHDEESGKDLSAFLKEARGQS
EKTTAGGAPLRKRQRLEETAATAEVPAFADSEDELEVSEEEEDEGQGAGDSGNCSEEDEE
TEDDDSEEEDAAEDEGKRAKEKEMNEEEEEGVLRWKDGLQQKAAEAFLRHQEAAPNLRKL
VYGAVLEADNSEEDEEELGGLFRVSRPQKSRRVQANAVDCSRFHPDTTHDWDLEEMLDTI
RDCFVTGKWDDGQDAATLLKQDEELYGDFEDLETGEVHKSQSGQEDVAENTDSDEDGEEE
VKVEEEVVQRNKRLEKKRRLKERFDAEYDDGDATYFDDLKEEMQKQAELNRAEFEDVDDE
TRVQYEGFRPGMYVRVEISSVPCEFVTNFDPHYPIILGGLVSSEGNIGYLQMRLKKHRWY
DRILKTRDPLILSLGWRRFQTIPLYHIEDHNGRHRLLKYTPLHMHCGASIWGPITPQGTG
FLALQSVAGVKANFRIAATGVVLDLDKSVTIVKKLKLIGYPYKIFKNTSFVKGMFNTVLE
VAKFEGASVRTVSGVRGQIKKALSTPPGAFRATFEDRLLMSDIVFLRSWYPVSVPQLYNP
ITSLLLPVGQKDGWSGMRTLGQLKLDLGIHNKPNQDSLYKPVVRAPRHFNPLHIPKELQK
ALPFKSKPKQQQAKGKTPRDLQRPKVIREPHERKVAALLHALRTVHNHKRKKAHSVQHAR
HKEFLQQKEKDEEAKMKRQKEARKRLYRVMGQTEQKKQRSSLKGEQKDS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagttcagaaacagaggaagcaccagcagaagcacagcggaccgaaggca
cagaagaagaagctgaggaagcaggccggggcggcagacggagatgagcggaaacgcaac
cccaaagccttcgccgtgcagtcggccgtccgcatggccaagaccttccacagggcccag
gacataaaagcgaaaaaacatcacatccctgtcgtggaccgcactccgctggaaccccca
cctgttgtgattgtggtcatggggccccccaaggtggggaaaagtaccctaatccgctgc
ctaatcaagaacttcactcggcagaagctcggggatatttgtggtcctgtgacgatcgtc
tctggaaagaaacgccgtctgaccttcatggagtgcaacaacgacatcaacaccatgatc
gatctggcaaaggtcgccgacctcgtcctgatgctgatcgacgccagctttggcttcgaa
atggagacgttcgagttcctcaacatttgtcaggtacacggcttccctcggatcatgggc
gttctcactcacctggactccttcaagaacaacaagactctgagaaagaccaagaagaac
ctgaagcatcgcttctggacggaggtgtaccagggagccaaactcttctacctgtcgggg
atggtgtacggggagtaccagactcaggaggtgaagaatctgggccgtttcatctcggtc
atgaagttccgccccttggtgtggcagacctcccacccctacgtcctggttgaccgcatg
gaggacctgaccgaccccgagaagatccgcacagagccaaagtgcgatcgcaccgtgtcg
ctctacggatacctgcgagggacacacttgaaaaacaagggccaggtccacgttccaggg
gtgggagactttgaggtgagtgacgtggacttcctgccggacccgtgccccctgccggac
gctcagaagaagcgagcgctgaacgagaaggagcgcctgctctacgcccccatggctggc
gttgggggggtggtgtatgacaaagacgccgtgtacattgacctccctgccagccacgtc
caccagcagcaggaggagatgagacccaccacggagctggtccagtccctcatcgacacg
cacgccactctggacgccaagatggctgccagcaaggtgtcgctcttcagcggctccggg
accatgggccccgaaggcgccggagagcagagcgggggtcaggatggactgcaggaggag
agcgtctgggattccaacaccaaccgacagaggaggagggtgctcttccctggagatgaa
gatgacggcagcgcgtcaagcagcgaggacgaggaggaggaagaggaggaggagagcgac
cacgatgaagagagtggcaaagatctgtctgccttcctcaaagaggctcgaggacagtct
gagaagacgactgcgggcggcgctcctctgaggaagaggcagaggctggaggagacggca
gcgacggccgaggtgccggcatttgccgacagcgaggacgagctggaggtgagcgaggaa
gaggaggatgagggtcagggggcaggagactctggaaactgttctgaggaggatgaagaa
acggaggatgacgattcagaagaggaagatgcagctgaagatgagggaaaaagagcaaaa
gaaaaagagatgaatgaggaagaggaggagggggttttgcgatggaaggacggtttgcag
cagaaggcggcggaggcgtttctccgacatcaggaagctgctcccaatctccgaaagctg
gtttacggcgccgtcctcgaggcggataactctgaggaggacgaggaggaactggggggg
ctgttccgcgtcagccggccacagaaaagcaggagggttcaggcgaacgccgtggactgc
tcccgtttccacccggacaccacccacgactgggatctggaggagatgttggacaccatc
agagactgttttgttacggggaagtgggacgacgggcaggacgctgccacccttctgaag
caggacgaggagctgtacggagactttgaagacctggaaacaggagaagtccacaagagc
caatcaggacaagaggatgtggccgagaataccgacagtgatgaagatggggaggaggag
gtgaaggtggaggaagaggtggttcagaggaacaagcgtttggagaagaagcggaggctg
aaggagaggtttgacgcggagtacgatgacggagacgccacctacttcgacgacctgaag
gaggagatgcagaagcaggcggagctgaacagagcggagttcgaggacgtggacgatgag
accagagtccagtacgaaggtttccggccagggatgtacgtgagggtggagatcagctcc
gtgccctgtgagttcgtcaccaactttgacccccactatcccatcatcctcggaggcctg
gtgtccagcgaaggaaacatagggtacctgcagatgagactgaagaaacaccgatggtac
gaccgaatcctgaagacgagggaccctctgatcctttccttaggctggcggcgcttccag
accatccccctctaccacatcgaagaccacaacggacgccaccgcctcctcaagtacacg
ccactgcacatgcactgtggagcctccatctgggggcccatcaccccacaggggaccggc
ttcctggctctgcagtccgtggcaggagtcaaagccaactttcgcatcgcggccacagga
gtggtcctggatcttgataaatctgtgaccatagtgaagaagctcaaactgattggttat
ccctacaagatcttcaagaacacttcctttgttaaggggatgttcaacacggtgctggag
gtggcgaaatttgaaggagcttcggtgcggacggtttcgggggtcagaggtcagataaag
aaggccctgtccacacctccgggggctttcagagctacgtttgaggaccgcctgctcatg
agtgacattgtgttcctgcgttcctggtatccggtgtcggttcctcagctctacaacccc
atcacctccctgctgctgccggtcggccagaaggacggctggtcggggatgaggacgctg
gggcagctgaagcttgacctgggcatccacaacaagcccaaccaagactctctctacaag
cccgtggtacgagccccgaggcatttcaaccccctgcacatccccaaggagctgcagaaa
gccctgcccttcaagagcaaacccaaacagcagcaggcgaagggaaagacgcccagagac
ctgcagaggcccaaagtgatacgagaaccccacgagaggaaggtggcggctctgcttcac
gctctgcgcaccgtccacaaccacaagaggaagaaagcccactcagtgcagcacgcccgg
cacaaagagttcctccagcagaaggagaaggacgaggaggcgaagatgaagagacagaag
gaggcccgcaagagactttacagagtcatgggacagacggagcagaagaagcagaggtcc
agtctgaaaggagagcagaaggactcgtga
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integrated database retrieval system
