Oryzias latipes (Japanese medaka): 101158654
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Entry
101158654 CDS
T02443
Gene name
apaf1
Definition
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04115
p53 signaling pathway
ola04210
Apoptosis
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101158654 (apaf1)
04115 p53 signaling pathway
101158654 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101158654 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
APAF1_C
NB-ARC
ANAPC4_WD40
CARD
eIF2A
CARD_2
AAA_22
Utp8
AAA_16
Motif
Other DBs
NCBI-GeneID:
101158654
NCBI-ProteinID:
XP_011489474
LinkDB
All DBs
Position
23
AA seq
1252 aa
AA seq
DB search
MALDERARACLLKSRHKLEEIMKPAYLMDHMISDEAITVEEEDMIANQNTKREQAAALVD
LLLKKDNYSFRSFYNALLKEEYDELANLLKEDLPLTQFTSSSQCPVQTVLSEGGVPPRPE
AFVHRPKEENEIREKLYKLQKQPGWVTVFGMAGSGKSVLASEAVRHKELIEECFPEGIHW
VSIGRLDKPDLLAKIQTLCFRLEQNLDSQQFHRPPSTLDEAKERLRFLMIRKYTRTLLIL
DDVWDSTVLKAVDIHCRILLTTRNRSLADVVNGSKHEVEVNSGLDEDKALEILSQLSKIE
MYRLPEEALSIVKKCQGSPLAVSMIGSLLRENPDRWGYYLRQLEKKQFRRIRKSSSYNYE
ALDQAIAAGIEDLSDDYRDLYNLLTVLHKDVKVTAKMMSVLWGQDQVDTEDTLSEFVNRA
MLFVDSQSQPNVFYLHDLQLDFLLEQNKNQLKSLHKKMVERYQHRYKDRPLTSRDEESLY
WIRYLAYHMANANLFQELHSLLFSLDWISVKGQIMGPAHLINDYLEYGSILDKENNEMCS
EFQEFLSLSGHYLEQRPFPDIVQLALSQPHTSEVYRQARLLAQERAKDGKLYFDLINETS
VDSLSRLVIHPHQGSLYACFSNDGTKIASCGATKNLKVFKSTSGEKLSEFELRDEVVCCA
FSPDDSLLAVCSSGRTIQVWNVHQVKLLRTFQEEHKEQINHCVFTNTTRRLLLATCSNDQ
MGNAKLWNLNKPTCQNTIFGHFEPVNHCCFSPDDNYVSTSSNDGTVKLFEATSGNIWKSI
DVRGMFKDPDNDDEVAVRCSSWTADGKRILCAARNAALMFDVETSDLLLEIRPSFLSTVL
HCDVCPTSNLLAMALSNYAVELWDIEENAKKADCSGHLSWVERVQFSRDGSQMLSCSDDE
TIRLWETKKLHMTSAVFLKRNTDVLFNDDNIFVSAPDHCNRLQVRDGRTGDTLLQSEKKP
SRIRCTCLLRDLSVVALGQEDGTVQVLAVPSAKPLATLLGHTKTVLHCQFTHYGQTLITS
SEDCTIRVWNLPSGECKVLQGHKEQVRCFALLSPSSNDSRLLSWSFDGTVKVWNTESGQK
LQDIDAHGGAILSCHVSPDGRLFATSSADRTAKLWHCEAWQCTFTLTGHQECVRSCRFSW
DSECLATGDDNGEIRLWNVNDGSLLRICSREVKDSMDSFHGGWVTDLHFSPDNSLLVSAG
GYIKWWDVKDGVALQTFYPKGNTLRKIHVSSDFSTFVTVDSIGILYVLQRVP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggccctggatgagagagcacgggcttgtctgctgaagtcccgccacaaactggaggag
atcatgaagccggcctacctgatggaccacatgatcagtgatgaagccatcacagtcgag
gaagaggacatgatcgctaatcagaacaccaagagggaacaagccgcagctttggttgac
ctcctgctgaaaaaagacaattacagcttcagatctttctacaacgctctgcttaaagaa
gaatatgacgagttggccaatctgctgaaagaggatctaccgctgacccagtttaccagc
agctctcagtgtcctgtccagactgtgctgagtgaaggaggcgtacccccaagaccagag
gcctttgtccacaggccaaaagaggagaatgaaatcagggagaagctctacaaacttcag
aagcaacctggttgggttacagtctttggcatggctggttcgggaaagtctgtacttgct
tctgaggctgtcagacacaaagaactcatcgaagagtgtttccctgaaggcatccactgg
gtgtccattggccgattggataaacctgacctgctggctaagatccagactttgtgtttt
cgtttggaacagaacctggattcacagcagttccaccggccccccagcactctggatgag
gccaaggaacgtttgcgcttcctcatgatccgaaaatataccaggactctgctgattctt
gacgacgtctgggacagcacggtgctgaaggccgttgatatccactgtcggattcttctg
accaccagaaaccggtcccttgctgatgttgttaatggtagtaaacacgaggtggaggtg
aactctggcttggatgaggacaaagcgctggagattctttctcagctgtccaaaattgag
atgtataggcttcctgaggaagctctaagcatcgtcaaaaaatgccaaggctctcctctg
gcggtgtccatgatcggctctctgctcagggagaatcctgaccgttggggttattacctc
agacagctagagaaaaaacagttccggcgtatcaggaagtcaagttcctataactacgag
gctttggatcaggctattgctgcaggcattgaagacttgtctgatgactacagagatctc
tacaacctcctgactgttctacacaaggacgtcaaagtcactgccaagatgatgtctgtt
ttatggggtcaggatcaagtggacactgaggacaccctctcagaatttgtcaacagagcc
atgctttttgtggactctcagtcccaacccaacgttttctacctccatgaccttcagctg
gattttttattggagcagaataaaaaccagttaaagagccttcacaaaaagatggtggaa
cgttaccagcaccgctacaaagacaggcctctgacctcaagagatgaggagtctctttac
tggatccgatacttggcttaccatatggccaatgctaaccttttccaggagctgcactcc
ctcttgttctccctggactggatcagcgtgaaggggcagataatgggtccggcccacctg
attaatgactatctggagtatggatccattctggacaaagagaacaatgaaatgtgcagt
gagttccaggagtttctgtccctgagtggccactacctggagcagcgtcctttccccgac
atcgtccagctcgctctctctcagccccacacctcagaggtttacagacaagctcggctg
ctggcacaggagagggccaaagacgggaagctctactttgacctcataaacgagaccagc
gtagacagtctgtcccgcttggtgattcatcctcatcaaggctctctgtatgcttgtttc
tcaaacgatggaacaaaaatcgcctcgtgtggagctactaagaacctcaaggtttttaaa
tcgacttcaggagagaaactttcagagtttgagctccgtgatgaagtggtctgctgtgcc
ttctcccctgatgacagcctgctggcagtctgctcaagtggaaggacaatccaggtgtgg
aacgtccatcaagtgaagttactgaggacctttcaggaggagcataaagagcagataaac
cactgtgtttttaccaacactacgcggcgcctcctgctggccacctgctccaacgaccaa
atgggaaacgccaagctgtggaatcttaacaagcctacctgtcaaaacacaatatttggc
cactttgaaccagtcaaccactgctgtttctcccctgatgataattatgtgtccacctcg
tccaatgatggtactgtgaagctgtttgaagccacatctgggaacatctggaagtcaatc
gatgtgagaggcatgtttaaagacccggataatgacgacgaggtggccgtcaggtgcagc
agctggacagctgatggcaaacgcatcctgtgtgctgccaggaacgctgctttgatgttt
gatgtggaaacgtcagacttgcttttggagatcaggcccagttttctcagcacggttcta
cattgtgacgtctgtcctactagtaacctgcttgctatggcactttctaactatgctgtg
gagctttgggatattgaagagaatgcaaagaaggcggattgcagcggtcatctcagttgg
gtggagcgtgtgcagttctcccgtgacggctctcagatgctctcctgctcggatgatgaa
actatcaggttgtgggagactaaaaagctccacatgacctcggcggtcttcctgaagaga
aacacagacgttttgttcaatgatgacaacattttcgtgtcggctccggaccactgcaac
agactgcaggttcgtgacggcagaactggagacacgttgctgcaatctgagaagaagccg
tccaggatccgctgtacctgtctgctcagggatctgtctgtggtggccctgggccaagag
gacgggactgtgcaggtgttggcagtgccctctgcgaagcctctagccaccctgttgggt
cacaccaagactgtgcttcactgccagttcacccactacggccaaacgctcatcacatca
tctgaggactgcaccataagggtgtggaatttgccgtcgggtgaatgtaaagtccttcag
ggtcacaaagagcaagtcagatgcttcgctctgctctccccatcttccaatgactccaga
ctgctgtcctggtcgttcgacggtaccgtcaaggtgtggaacacggaaagcggacagaag
ctgcaggacatcgacgctcacgggggagccatcctgtcctgtcatgtctcaccagacgga
agactgtttgctacctcctctgctgacaggaccgctaagttgtggcactgtgaggcctgg
cagtgtaccttcaccctgacggggcaccaggaatgcgtccgaagctgcagattctcgtgg
gacagcgaatgcctcgcgacaggagacgacaacggggagatccggctctggaatgtcaat
gacggttcgcttctgaggatttgttcccgagaagtgaaggacagcatggactccttccac
ggaggctgggtgactgatctgcacttctctccggacaactctcttctggtctcagctgga
ggctatatcaagtggtgggacgtgaaggacggggtcgccctgcagaccttctacccaaag
ggaaacactctgaggaagatccacgtgtcgtcagacttctccaccttcgtcaccgtcgac
agcatcggcatcctctacgtcctgcagagagtaccttga
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