Oryzias latipes (Japanese medaka): 101159973
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Entry
101159973 CDS
T02443
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ola
Oryzias latipes (Japanese medaka)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
NKWYS
Motif
Other DBs
NCBI-GeneID:
101159973
NCBI-ProteinID:
XP_004066384
UniProt:
H2MKH9
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Position
1:36813194..36838200
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AA seq
582 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKSGPAGKEREKEAKALANFVKDSGKETKTKGKDAKEGKKDTSSS
TQGVAFHVDNTIKRPNPTQGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLAIMSIENCPLTHLPAQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaggattcaaaggaaaaggaccccaaaagtggccct
gcaggtaaagaaagggaaaaggaggccaaggcgttggccaactttgtcaaagacagcggg
aaagaaacaaagaccaaagggaaagatgccaaagaaggaaagaaggacacaagcagctca
acacagggcgttgccttccatgttgacaatacgataaagaggccaaacccaactcaaggt
acacgcaagaagtccagtaacgcagaggttatcaaagagcttaacaaatgtcgagaggag
aactccatgagactggatctgtcaaagcgctcaattcacatgcttcccacctctattaaa
gagttaaatcagttggcagaactctatttgtacagcaacaagcttcagagcctgccagcc
gaggtaggttgcctatcaggcctggtcacattggccctcagcgagaactccttgaccagt
ttgcctgattcactggactccctgaagaagctcagaatgcttgacctccggcacaacaag
ctcagagagatacccgccgtcgtctaccgcttgacatcactgaccacgctgtacctgcgt
tttaaccgcatcacaacagtggagaaggacatccgaaacctgtccaagctcaccatgctc
agcatccgagagaacaagatcaaacagctgcctgcagagatcggggagctatgcaatctc
attactttggatgttgcccataatcagttggaacatctacccaaggagattggaaattgc
acacagataaccaaccttgacttgcagcacaatgagcttttggacctcccagaaacaata
ggcaatttggcaagcataaatcgcttagggctacgatataacagattgtcggccatccca
agatctctagccaaatgccgggaactggaggagctaaacctcgaaaacaacaacatctca
gtgttgccagagggtcttctgtcaagtttggttaacctgaccagtctaacactggcaagg
aactgctttcagtcttaccctgtgggcgggccatcgcagttctccaccatctactccctc
aacatggaacacaaccatatcaacaagatcccatttggcatcttctcaagggccaaagtc
ttaagcaagcttaacatgaaggacaaccagttaacatctctgccactggactttggcaca
tggaccagcatggttgaactgaaccttgccaccaatcagctggctaagatcccagaagat
gtctgtgggctcgtttcccttgaggtgctgatattgtccaataatcttctgaagaagtta
ccgcatggtattgggaatctgaggaagctgcgagagcttgatttggaagaaaacaagttg
gaatgtctgccaaatgaaatcgcttacctgaaggacttacagaaattggttctgacaaat
aatcagctgaccacgttgcccagagggattggccacctcaccaacctgactcacctgggg
ttgggggagaacctgctgcagcaccttcctgaggagatcggaacactggagaacctggag
gaactgtacctcaacgataaccccaacctccacagcctcccgtttgagctggccctctgc
agcaagctggccatcatgagcattgagaactgtcccctcactcatctgccggctcagatt
gtggcaggaggcccttccttcatcatccagttcctcaagatgcagggaccctaccgtgcc
atggtctga
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