Oryzias latipes (Japanese medaka): 101160646
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Entry
101160646 CDS
T02443
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X2
KO
K14298
mRNA export factor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101160646 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101160646 (rae1)
03036 Chromosome and associated proteins [BR:
ola03036
]
101160646 (rae1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101160646 (rae1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101160646 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
101160646
NCBI-ProteinID:
XP_004069122
UniProt:
A0A3P9LG69
A0A3B3IIT7
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All DBs
Position
5:complement(25423692..25429709)
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AA seq
368 aa
AA seq
DB search
MSLFGTTSSFGTGGTGVFGTTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPTPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPQNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcggaacaacctctagttttggaacaggggggaccggtgtctttggaacc
acgacaacagacagccataaccctatgaaggatgttgaagtgacttcacccccagatgac
agcatcagctgtctggctttcagcccccctaccatgccaggaaactttcttatcgcagga
tcctgggccaacgatgtgcggtgctgggaggtgcaggacaatgggcagactgtccctaaa
gcccagcagatgcacacggggcccgtgctggatgcttgctggagtgatgacgggagtaaa
gtcttcactgcatcatgtgacaaaacagccaagatgtgggatcttaacagcaatcaagca
atgcagatcgcccagcatgacggcccaattaaagcaatccactggataaaagcacccaat
tacagctgtatcatgacaggcagttgggataaaacattaaagttctgggacactcggtcc
cccactcctatgatgtccctgcagatgcctgaaagatgctactgtgcagatgttgtgtac
cccatggcggtggtggccacggcagagagaggtcttattgtgtaccagctggagaaccag
ccctccgagttccgcagaatagactcgcctctcaaacatcagcaccgctgtgttgccata
tttaaggacaagcagaacaagcccaccgggtttgcactgggaagcattgaaggcagagta
gcaatccactatattaatcctcaaaacccagccaaagataactttaccttcaagtgccac
aggtccaacgggaccaacacaaccactccacaggatatctatgctgtgaacgccattgcc
ttccatcctgtccacggcactctggccactgtgggctcagatggacgcttcagcttctgg
gacaaagacgcccggaccaagctgaagacctccgagcagcttgaccagcccatcacggcg
tgctgcttcaacaacaacggcaacatctttgcgtacgcttccagctacgactggtcaaag
ggccacgagtactacaacccccagaagaaaaactacatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatga
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