KEGG   Oryzias latipes (Japanese medaka): 101160646
Entry
101160646         CDS       T02443                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X2
  KO
K14298  mRNA export factor
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101160646 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101160646 (rae1)
   03036 Chromosome and associated proteins [BR:ola03036]
    101160646 (rae1)
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101160646 (rae1)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101160646 (rae1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 101160646
NCBI-ProteinID: XP_004069122
UniProt: A0A3P9LG69 A0A3B3IIT7
LinkDB
Position
5:complement(25423692..25429709)
AA seq 368 aa
MSLFGTTSSFGTGGTGVFGTTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPTPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPQNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtttattcggaacaacctctagttttggaacaggggggaccggtgtctttggaacc
acgacaacagacagccataaccctatgaaggatgttgaagtgacttcacccccagatgac
agcatcagctgtctggctttcagcccccctaccatgccaggaaactttcttatcgcagga
tcctgggccaacgatgtgcggtgctgggaggtgcaggacaatgggcagactgtccctaaa
gcccagcagatgcacacggggcccgtgctggatgcttgctggagtgatgacgggagtaaa
gtcttcactgcatcatgtgacaaaacagccaagatgtgggatcttaacagcaatcaagca
atgcagatcgcccagcatgacggcccaattaaagcaatccactggataaaagcacccaat
tacagctgtatcatgacaggcagttgggataaaacattaaagttctgggacactcggtcc
cccactcctatgatgtccctgcagatgcctgaaagatgctactgtgcagatgttgtgtac
cccatggcggtggtggccacggcagagagaggtcttattgtgtaccagctggagaaccag
ccctccgagttccgcagaatagactcgcctctcaaacatcagcaccgctgtgttgccata
tttaaggacaagcagaacaagcccaccgggtttgcactgggaagcattgaaggcagagta
gcaatccactatattaatcctcaaaacccagccaaagataactttaccttcaagtgccac
aggtccaacgggaccaacacaaccactccacaggatatctatgctgtgaacgccattgcc
ttccatcctgtccacggcactctggccactgtgggctcagatggacgcttcagcttctgg
gacaaagacgcccggaccaagctgaagacctccgagcagcttgaccagcccatcacggcg
tgctgcttcaacaacaacggcaacatctttgcgtacgcttccagctacgactggtcaaag
ggccacgagtactacaacccccagaagaaaaactacatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatga

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