Oryzias latipes (Japanese medaka): 101161477
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Entry
101161477 CDS
T02443
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101161477 (rnf13)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101161477 (rnf13)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101161477 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
Prok-RING_4
zf-RING_4
PHD
zf-RING-like
zf-C3H2C3
RINGv
Motif
Other DBs
NCBI-GeneID:
101161477
NCBI-ProteinID:
XP_004067940
UniProt:
H2LT22
LinkDB
All DBs
Position
4:complement(12515774..12555289)
Genome browser
AA seq
375 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTENFDDMPARFGFRLP
SDGLKGFLIGARPENACEPIEPPPSDNLTGAFIVLIKRFDCNFDVKVLNAQKAGYKAAIV
HNVDSDDLISMGSNDLDVVKQIVIPSVFVSSEAANTLKGDYMYDKGGHVVLIPDFSLPLE
YYLLPFLLIVAICLILIAVFMITKAVQDCRKAWKSRLRKDQLKKLPIHKYQKGDSYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSEESSPED
NEEVSESTPLLRSLASTGAHSFGTMSSASRSEQDSSEYEDEELDSSDSEEVTLETVVVQM
QQPCCESRDQDLPRA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtctttgggaatgctgatgctctcagccacgcagatttacaccatcttcact
gttcagctctttgccttcctcaacctgctgcctgtggaggcagacattgctgcttattcg
tttgacaacaaaacagaaaactttgatgacatgcctgctcggtttggcttccggctcccc
agtgatggattaaagggctttctgattggtgcacgaccagaaaatgcctgtgaacccatc
gaacctcctcccagcgacaacttgacgggcgccttcatcgtcctcatcaagcggtttgac
tgcaattttgacgttaaggtcctcaatgcccagaaagctggatacaaggcagccattgtt
cacaatgtagactctgatgacctaatcagcatgggatccaatgatttggatgttgtgaag
cagatagttattccctctgtgtttgtaagttcagaagctgccaacactctgaaaggtgac
tacatgtatgacaaagggggacatgtggtcctcatcccagacttcagcctgcctctggag
tattacctgctaccctttctcctcattgtggccatctgcctcattctcattgccgttttc
atgataaccaaagctgtgcaggattgtcgcaaggcttggaagagtcgtctgcgcaaagat
cagctgaagaagcttcccattcacaaataccagaaaggggacagctatgatgtctgtgcc
atctgcctggatgaatatgaagaaggagacaaactcagagtcctgccctgttcacacgct
tatcacagcaagtgtgttgacccctggctgaccaaaaccaagaagacgtgtccagtgtgc
aagcagaaggtggtcccttcccagggcgactctgattcagaggagagcagccccgaggac
aatgaagaggtttcggagagcacgccgctcctgcgatccttggcctcaaccggcgctcac
tccttcggcaccatgtcaagcgcgtctcgctcggagcaggactcctccgagtatgaggac
gaggaactggacagcagcgacagcgaggaggtcaccttagagactgtggtggtacagatg
cagcagccgtgctgcgaaagccgcgatcaggatctgcctcgagcttga
DBGET
integrated database retrieval system
