Oryzias latipes (Japanese medaka): 101163147
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Entry
101163147 CDS
T02443
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola02010
ABC transporters
ola04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101163147
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101163147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101163147
Transporters [BR:
ola02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101163147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
101163147
NCBI-ProteinID:
XP_004066316
LinkDB
All DBs
Position
1:32364924..32396708
Genome browser
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRHPTPGESPGVVGNFNDSIISRLLTDAKKILLYSQNDK
SYEGYKGLLRALRKLQKNTARFKLKDFLQDNETLSHFLHHNASLPHHTLRHIVEAEVNLE
KVLTKGFGFHLRDLCNTTSLEEFVVIADPNVSRLTQQIICNSSSDWLNKAQSHFLSNLDF
LKPIRRDVKSDPKVVQEVSAATDNLLESLGALAVEFSSMKSWKDMRKEILYLTANPTGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDIEPMSIYDNSSTPYC
NNLMKSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLGGM
WEEMKPQFWNFMENSEEMDMVRNLLQSNVGAAFLNAQLSGTEWRVSDVANFLSKASEDKR
PAGTAYTWRDAFNESDHAIQTISRFMECVNLDKLEPVANEERLVNKSMSLLDNQKFWAGI
VFPDIVHSDNSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEQGIIRAVTGSKEKTGIYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVMLLKMGNLLPYSDP
GVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVLVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIESVFPGQYGIPRPWYFPFTKSYWCGEKENKNMSALLSKKGNAEAVCIEEEPGH
IEPGVYIENLVKVYSHGNKLAVDGLSLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRSELSTIRQNLGMCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQ
IVNDVGLPHKRKSRTNTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTMVKRDY
DLALQSCRNSASTVSYSKKTEKEDSISESSSDAGLGSEPDSETTTIDVSLISNVIFKHVR
EARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRRHAFGDHQSCLKPFTEDEFDFNDSEGDPESRETDWLGGA
DGKGSFQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALHPSMYGEQFSFISNDMPDDPHTNKLLGALMEKPGFGSRCMKGEPIPNTPCTA
VEDEWAVPEVSESLRDIFAKGNWTRENPSPLCQCSCEGRKRMLPECPDGAGGLPPPQMRI
SDKDTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQFLSHKDDI
DVAIAQLRRRFHLERGTAADRFFHSLSSFIQGLDSKNNVKIWFNNKGWHSISSFLNVMNN
GILRASLPAGKDPTKFGITAYNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAVEGVVFFCITVLIQYRFCITTRSSISHLKPIGEEDEDVARERQRVLSGSGQSDI
LELRELTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTSGEAY
LAGKSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMGFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKETLCIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDVHLSKRDAVVVDLSQLNSFLVDSKSRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcagttgggtttgctgctgtggaagaactttacctaccgacggaga
caaactatccagctgctcattgagatcatctggcccctgttcattttctttattttgata
tcagtccggatgtattacccaccctatgaacaacatgaatgccacttccccaacaaagcc
atgccctctgcaggcaccctgccatgggttcaaggcatcatctgtaacgccaacaacccc
tgcttccgtcatcccactccgggagagagtccaggagttgtggggaattttaatgactca
ataatctctcgtttattgactgatgccaagaagatcctgctctactctcagaacgataag
agctacgaaggctacaaaggactgctgagggccctcaggaaacttcagaagaacactgcc
cgtttcaagctgaaggacttcttacaagacaatgaaactctttcccattttctgcaccac
aatgcatctcttcctcaccacacgctaaggcacattgtggaggccgaagtcaatcttgaa
aaggtgctcaccaaaggttttgggttccatcttcgcgacctctgcaacaccacctctctg
gaggagtttgtcgtgattgctgaccctaatgtttcccgtttaactcaacaaataatctgc
aactcatcaagtgactggctgaacaaagctcaaagccacttcctctccaacttggatttc
ctcaaacccatccggagggatgtgaagtcagaccccaaagttgttcaggaagtctccgct
gcaactgacaaccttctggagagcctgggagcgttggccgtggagttttccagcatgaag
agttggaaggacatgaggaaggagatcctttatctgactgcaaaccccacggggtctcca
aaccaaatgtaccaggccgtgtcccggattgtgtgtggacacccagagggagggggcctc
aaaatcaagtctctcaactggtacgaagacaacaactacaaggccctgtttggaaaccac
ggcaacgacagtgacatcgagccaatgtccatttacgataactcctccaccccttactgt
aacaacttgatgaagagcctggaatccagccccatctccagaatgatctggcgagcacta
aagcctttgctcatggggaagattctgtacaccccagacactccagcgacacagaggatc
atccacgaggttaataagaccttccaggagctgggcgttctgagggacctggggggaatg
tgggaagaaatgaagccccaattctggaacttcatggagaacagtgaggaaatggacatg
gtcaggaacttgcttcagagtaatgtcggcgctgcgttcctgaatgcacagctcagtggg
actgagtggcgcgtctcagatgtggcaaacttcctgtcgaaagcctcagaggacaaaaga
cctgcagggactgcatacacctggagagatgccttcaatgagagcgaccacgccatccag
accatttcccgcttcatggagtgtgtgaacctggataaactggagccggtggcaaacgag
gagcgtttggtcaacaagtccatgagtctcctggacaaccagaagttctgggcaggaatt
gtgtttcctgacattgtgcacagcgacaacagcgacctgccccccaatgtcaactacaag
atccgcatggacatcgacaacgtggagagaaccaacaagattaaagatggatattgggac
cccggtcccagggcagaccctttcgaggaccttcggtacgtctggggcgggttctcgtac
ctgcaggacgtcatagagcagggaatcatcagagctgtcactggctcaaaggagaagaca
ggcatctacattcagcagatgccgtacccgtgctacgttgacgacattttcttgcgagtg
atgagtcgctccatgccgctcttcatgactctggcctggatgtactcggtggccatcata
atcaaaggcgtggtgtacgagaaggaggcccgcctgaaggagaccatgaggatcatgggg
ctgaacaacggcaccctgtggctgagctggttcatcagcagcttaatcccgctgctgatc
agcgcagggctgctggtgatgctactgaagatgggcaacctgctcccgtacagcgatcct
ggagtagttttcctgttcctgggatccttcggcgtcgtaaccatcatgcagtgcttcctc
atcagcacgctgttttctcgtgccaacctggcggcggcgtgcggtggcatcatatacttc
actctctacttgccttacgttctgtgtgtggcctggcaagactacgtgggatttggagct
aaagttttagtgagtctgctgtctccagtggcttttggcttcggctgcgagtactttgcc
ttgtttgaagagcaaggagtgggaatccagtggtccaacttgctggcaagccccttagag
gaggacagctacaacctaaccacatccatctgcctcatgctgttcgatgccgtgttgtac
ggaatcatgacctggtacattgaatctgttttccctggtcagtatgggatccccaggccc
tggtatttccctttcaccaaatcctattggtgtggagaaaaagaaaataaaaacatgtct
gcgttgctttcaaagaaggggaatgctgaggcagtgtgcattgaggaggaacccggccac
attgaacctggtgtttacatcgagaaccttgtgaaggtctacagtcacggaaacaagctg
gccgtcgatgggctgagcctgaaattctacgaaggacagatcacctccttcctgggtcac
aacggagccggcaagaccacaaccatgtctattctgactgggttgttcccacccacctct
ggcaccgcttacatcctcgggaaggacatccgctccgaactcagcaccatccgacagaac
ctgggcatgtgcccacagcacaacgtgcttttcagcatgttgacagtagaggaacacatc
tggttctatgctcgcctgaaagggctctcagaggagaaagtaaaggcggaaatggaacag
attgtgaatgacgttggccttcctcacaaacgaaagtctcgcacaaacaccctgtcaggt
gggatgcagaggaagctgtcagtggctctagcttttgtcgggggctccaaagttgtgatt
cttgatgaacccacagctggtgttgacccctatgctcggaggggaatctgggacctgttg
ctaaagtacagacagggccgtacaatcattctgtccactcatcacatggatgaggctgac
atactgggggacagaattgctatcatttcccatggtaagctctgctgcgtgggctcctcc
ctcttcctgaagactcaccttggtacaggctactacctgacgatggttaaaagggactac
gacttggctctgcagtcctgcaggaactccgccagcaccgtttcctacagcaagaaaaca
gagaaggaggacagcatatccgagagcagttcagatgcaggcctgggcagtgaacctgac
agtgaaaccaccactattgacgtttctctcatctctaacgtgattttcaaacatgtccgg
gaggctcgcctggtggaggatcttggacacgaactcacctacgtcttgccctaccagtca
gctaaagatggagcctttgtggagctcttccatgagcttgatgaccggcttactgatttg
ggaatatcgagttatggaatttccgataccactctggaagagatctttctgaaggtggca
gaagacagcggagttgatgctgttgagctttcagacggagtcgtaccgactcggactcgt
cgacgtcatgcttttggagatcaccagagctgcctgaaacccttcactgaggacgaattt
gacttcaacgactctgaaggtgatccagaatcccgtgagacggactggcttggtggggca
gacggcaaaggttccttccaggttaaaggctggagtctgaagaggcagcagttcgttgct
ctgctgtggaaacgctttctctacgcccggcgctccaggaaaggcttctttgctcagatt
gtcctcccagcagtgtttgtgtgcatcgccctggtattcagcctgatcgttccccccttt
ggaaagtaccccagcttggctctgcatcccagcatgtatggagaacaattttctttcatc
agcaatgacatgcctgacgaccctcacaccaacaaactgctgggagctctgatggaaaaa
cccggctttggatctcgctgcatgaagggagagcccatacccaacaccccctgtactgct
gttgaagatgagtgggcagtccctgaagtctctgagagtttgagggacattttcgccaag
ggcaactggaccagggagaacccttctcccttgtgtcagtgcagctgtgaggggcgtaag
aggatgctgccggagtgtcctgatggggctggtggactcccaccaccacagatgaggatc
agtgacaaagacaccctgcagaacctgacgggcagaaatgtatcagactatctggttaaa
acctacgcacagatcattggaaaaagcctgaaaaacaagatttgggtcaacgagttcagg
tatggtggattctcactgggtgcaaggagctcccagtttctgtctcacaaagatgacatt
gatgttgcaattgctcagctgaggaggcgcttccatcttgaaagaggaactgcagctgat
cggtttttccacagcctctccagttttatccagggattggactccaagaataatgtcaag
atctggttcaacaacaagggctggcacagcatcagctccttcctcaatgtgatgaacaac
ggcatcctgcgcgccagtctgccagctggaaaagaccccaccaagtttggcatcacagcc
tacaaccacccgctgaacctcaccaaggagcagctgtcacaggtggcattgatgacgacg
tcggtggacgtgctggtgtcgatttgcgtgatcttcgccatgtcctttgtcccggccagt
tttgtggtctttctcatccaggagcgagtgaacaaggccaaacacatgcagttcatcagt
ggagtgcagcccttcctctactggctggccaactttgtgtgggatatgtgtaattacatc
gttccagccacactggtgatcatcatatttgtgtgtttccaacaagacgcctacgtctcc
tcgaccaatctgccagtgctggccctgctgctcctgctttatggatggtcgatcacccct
ttgatgtacccagcctctttcttcttcaagatccccagcactgcctacgtggttctaacc
agtgtcaacatactgataggaatcaatggcagcgtgtcaacgtttgtcctggagctgttt
ggaagtaacgagatcggagggatcaatgacatcctgaagaatgttttcctcatcttccct
cacttttgcttgggcagaggactgatcgacatggtgaagaatcaggccatggctgatgct
ttggagcgattcggtgaaaatcggttccgctcgccgctcgcctgggacatggtgggaaaa
aacctgtttgcaatggccgtagaaggggtggtgttcttctgcatcacagtcctcattcag
tatcgcttctgcatcaccactcggtcttccatcagccacctgaagcccattggagaggaa
gatgaggacgtggccagagagcgccagagggtcctgagcgggtcgggccagtcagacatc
ctggagctgagggagctcaccaagatttacaaacggaagcagaagccagccgttgaccgg
ctgtgcgttggcatccctcctggagagtgtttcggtctgcttggagtgaacggagcagga
aagacgagcaccttcaaaatgctgacgggagactccctggtcaccagtggggaggcgtac
ttggcaggcaaaagtgtaactactgagatagatgaggtgcatcagaacatgggctactgt
cctcagtttgatgccatcaacgacctgctgaccggcagagagcatcttgaattctatgcc
attctgagaggagtacccgagaaggaagtctgcgaggtggcagagtggggcatccggaaa
ctgggattggtcaaatatgttgacaaatcggccgggagctacagcggaggaaacatgagg
aagctgtccaccgccatcgctctcattggaggacctcctgttgtgtttctggatgagccc
actacgggcatggacccgaaggcacgccgagccctctggaacgccatcctgagcatcatc
aaagagggacgctccgtggttctgacgtctcacagcatggaggagtgtgaagctctgtgc
accaggatggccatcatggtcaacggcaggttccgctgcctgggcagcgtgcagcacctg
aagaacaggtttggcgacggctacaccatcatcctgcgagtggcggggccagacccagac
cttcggccggtgatgggcttcatcgagcgggagcttccagggagcacgctgaaggagaag
caccgcaacatgctgcagtaccagctcccctcatccctcacctccctagcccgcatcttc
tccctcctgtccaagaacaaggagacgctctgcatagaagactattctgtgtcccagacc
accttagaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccacttgaaa
gacgtccacctgagcaagcgggacgccgtcgtcgtggacctttcacagctcaactctttc
ctcgtagacagcaagagcagggagagctgcgtctga
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integrated database retrieval system
