KEGG   Oryzias latipes (Japanese medaka): 101163300
Entry
101163300         CDS       T02443                                 
Symbol
plrg1
Name
(RefSeq) pleiotropic regulator 1 isoform X2
  KO
K12862  pleiotropic regulator 1
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101163300 (plrg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101163300 (plrg1)
   03400 DNA repair and recombination proteins [BR:ola03400]
    101163300 (plrg1)
Spliceosome [BR:ola03041]
 Complex B
  Other components
   Prp19 complex
    101163300 (plrg1)
 Complex C
   Prp19-CDC5 complex
    101163300 (plrg1)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    101163300 (plrg1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 Nucleoporin_N WDR54
Other DBs
NCBI-GeneID: 101163300
NCBI-ProteinID: XP_004066007
LinkDB
Position
1:20802384..20808597
AA seq 509 aa
MTEEVQKHSVHTLVFRSLKRTHDMFVADHAKAVALDDESHKLKLAVKLKADYSPVLHMPV
LKEGKDRMSQYPDGLHDNEAYMQPDDPEYLITGTHAYPSGPGVALTADTKVHRNPSESGI
HSLALALPPSQARQESSRTAATVAEIRRGAERAHAQSTALLLLEGGGTRNSNLLRRTPVM
PKPQWHPPWKLFRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGH
ISTVRGVAVSSRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLMT
CSRDATARVWDIRTKANVHTLTGHTNTVATVRCQAAEPQVITGSHDSTIRLWDLIAGKTR
ATLTNHKKSVRTLVMHPRQYTFASGSADNIKQWMFPDGNFIQNLSGHNAIINTLAVNSDG
VLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFACVFDHSESRLITAEADKT
IKVYKEDETATEESHPVNWKPEILKRKRY
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaccgaggaagtccagaaacactcagtccacactttggtcttcagatccttgaaaagg
actcatgacatgttcgtggctgaccatgctaaagccgtcgctttagatgatgaaagccac
aagttgaagttggccgtgaagctaaaggcagactacagtcctgtgttacacatgccagtg
ctaaaagaaggaaaggacaggatgtcacagtatccagacggtctccacgacaacgaagct
tacatgcagccggatgatcctgaatatctgatcacgggaacgcacgcttatccctctgga
cctggagtcgccctgacagctgacacaaaagtgcacagaaaccccagtgagtcaggaatc
cactccttggctctggctttaccaccatcacaagcaagacaagagtccagccgcactgca
gccacagttgcagagatccgtcgtggagcagaaagagctcacgctcagtccaccgctctg
ctgctcttggaaggaggcggcaccagaaattccaacctcttgaggagaacgccggtcatg
cccaaaccgcagtggcatcctccctggaaactctttagagtcatcagcggccacctgggc
tgggtcaggtccatcgctgtggagcctggaaatcagtggtttgtgacaggatctgcagat
agaacaataaagatctgggacctggccagtgggaagctgaaactgtctctgactggacac
atcagtacagtgcgtggagtggcggtgagcagccgcagtccgtaccttttctcctgcgga
gaggataagcaagtcaaatgctgggatctagagtacaacaaggtaatccggcactatcat
ggccacctcagtgctgtgtatgatttggaccttcatccaactattgatgtcttgatgacg
tgcagcagagatgccacagcgagggtgtgggacatcaggaccaaagcaaatgtgcacacc
ctaacgggtcacaccaacactgtcgccacggtgagatgtcaggcagcagaacctcaagtc
atcaccgggagccacgattccaccatcaggctgtgggatctgatcgcaggaaaaaccaga
gcaactctgaccaaccacaagaagtccgtccggacgctggtgatgcatcccagacaatac
acgtttgcctctggatcggctgataacatcaaacagtggatgttccccgacggaaacttc
atccagaacctgtccggtcacaacgccatcatcaacacgctggctgtgaactctgatgga
gtgttggtgtctggagctgacaacggaaccatccacatgtgggattggaggacgggatac
aacttccagaggatccacgcggccgtgcagcccggatctctggacagcgagtcgggaatc
ttcgcctgtgtgttcgaccactcggagagccggctgatcaccgcagaggccgacaagacc
atcaaagtgtacaaagaggacgagacggctacggaagaaagccatccagtcaactggaag
ccagaaatcctcaagagaaaaagatattaa

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