Oryzias latipes (Japanese medaka): 101166217
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Entry
101166217 CDS
T02443
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04217
Necroptosis
ola04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101166217
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101166217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101166217
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
101166217
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
101166217
Multi subunit Ring-finger type E3
LUBAC complex
101166217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RanBP
zf-RING_5
ubiquitin
zf-C3HC4
zf-RING_11
IBR
zf-C3HC4_4
DUF1822
Motif
Other DBs
NCBI-GeneID:
101166217
NCBI-ProteinID:
XP_011473226
UniProt:
H2LNF9
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All DBs
Position
5:12100951..12109484
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AA seq
518 aa
AA seq
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MASRATRKGDLKKAEELASSLSEALSCGDSEEAVRLSRKLAQLSVPVSVSISSQAYPQDR
IRLRVGVEDAQSESSIPVTLEVSSAMTIAQLKDKINRDFGFHPLLQRWVIGKRLAQDRDT
LYSHGIRSNGDQAFLFIRSASSARLTRHQYNLDQEQQLLESIVESIPSMELCSRGFGGNA
TEKKVLPPSVPPKTYKTAKPANPPKPQLGWSCKTCTYVNKPTRPGCEMCGDERPDDYLVP
DLYQPDQEEVERLQLEDLALLQYQEAQQEERQQNYLNLLATDEQNLIVNATVADCPICFN
ALQPGEGVVLRECLHTFCRECLIGTIRNSNNAEVSCPDDCESKLLDREIKELLTEEEHQR
FLELRLSIAESRSEHSFHCQTPNCRGWCIYEDEVNEFHCDLCLEVNCLLCRAIHKDMNCK
DYQDDLRIRAQNDKAAQQTKQMLESMLQNGEAMNCPRCAIIVQKKDGCDWICCLMCKTEI
CWVTKQARWGPNGPGDTSGGCRCRVNNQPCHPNCQNCH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagagctacacgcaaaggcgacctgaagaaggcggaggagctcgcctcctcc
ctgagcgaagccctcagctgcggggactccgaggaagcggtgcggctgagccggaagctg
gcccagctgtctgtcccggtgtcggtcagcatcagcagccaggcttatccacaggaccgc
atcaggttgagggttggagtggaggatgctcagtcagagagctccatcccggtgaccctg
gaggtctcctctgccatgacgatagctcagctgaaggacaagatcaaccgggattttggc
ttccaccctttactccagcgttgggtgattggcaagcggctagcccaagaccgggacacg
ctgtacagccacggcatccgcagcaacggggatcaagcttttctcttcatccgctctgcc
agttcggctcgtctgactcgccatcagtacaacctggaccaggagcaacagctgctagag
agcattgttgaatcaatcccatccatggagctttgttccagaggatttggtggaaatgcc
acagagaaaaaagttcttcccccctctgttcctcctaaaacctacaaaactgctaaacca
gccaatcctccaaaacctcagctgggctggtcttgtaagacgtgcacttacgtgaacaag
ccgacccgccccggctgtgagatgtgtggtgacgagaggccagacgattacctggtgcct
gacctctaccagccagaccaagaagaagttgagcgacttcaactagaagacctggcactt
ctgcagtaccaagaggctcaacaagaagaacggcagcaaaactatttgaacttgttggcc
acagatgagcagaaccttatcgtcaacgctacggtggcagattgtcccatttgcttcaac
gctctgcaaccaggagagggcgtcgtgctcagagagtgtctgcacactttctgcagggag
tgtttaataggcacaataagaaacagcaacaatgctgaagtgtcgtgtccagacgactgt
gaaagcaaactactggacagagagatcaaagagctgctcaccgaagaggagcaccagcgc
tttttggagttgcgtctaagtattgcagagagtcgatcggagcacagctttcactgccag
acccctaactgcagaggatggtgcatctacgaagatgaagtcaacgagtttcactgcgac
ctctgcttggaagtcaactgccttctctgccgggccatccacaaagacatgaactgtaag
gactaccaagatgacctgcgcatccgagcacagaacgacaaagcagctcagcaaactaag
cagatgctggagagcatgcttcagaatggagaggccatgaattgtccacggtgtgccatc
attgtgcagaaaaaggatggttgtgattggatctgctgtttgatgtgcaagacggaaatc
tgttgggtcaccaaacaagctcgatggggaccaaacggacccggcgacacctccggtggc
tgtagatgtcgagtcaacaatcagccgtgccatccaaattgccaaaattgccactga
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