Oryzias latipes (Japanese medaka): 101167063
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Entry
101167063 CDS
T02443
Gene name
atm
Definition
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03440
Homologous recombination
ola04068
FoxO signaling pathway
ola04110
Cell cycle
ola04115
p53 signaling pathway
ola04210
Apoptosis
ola04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101167063 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
101167063 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101167063 (atm)
04210 Apoptosis
101167063 (atm)
04115 p53 signaling pathway
101167063 (atm)
04218 Cellular senescence
101167063 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101167063 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101167063 (atm)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101167063 (atm)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101167063 (atm)
Protein kinases [BR:
ola01001
]
Serine/threonine kinases: Other
PIKK family [OT]
101167063 (atm)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Termination Factors
Other telomere regulation proteins
Others
101167063 (atm)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
Check point factors
Other check point factors
101167063 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
DUF3310
Motif
Other DBs
NCBI-GeneID:
101167063
NCBI-ProteinID:
XP_011481164
LinkDB
All DBs
Position
13
AA seq
3079 aa
AA seq
DB search
MSLALHDLLLCCRGLEHDKATERKKEAENFRRLLRSPAVLQELDCASLAKAKVSKQLTWD
NVFRFLQHYVQKEMESIQSSRSNVTATTLAIRQKKMAEVCSLIKYFIRYANKRGPRLNCS
ELLKHVTEVLQSSHCCTAYGENYSSILLKDILTVRKYWCDISQKQWQNLLDLYCGFFNSS
SRSINRVLLSRVIHTLVRGCCTQTDAFTDALFGFFTKALLNARQEKHLPVLEHLVSALNV
FLRSAAVNCRMRACRLGEELLPSVLYVWADMRPSAPLKEEIVDFLNLQMCVHHPKGAKTH
DTGAHAEDWTRWRGLLYSLYDSLVREISQIGSRGKYATGSRHVAVKDNLIELTADICHQL
FTDDSGSHTLEVTQAPHRATQMGSPSHGAASKRRRIEMGWEVLLERLQPQSDDFDIIPWL
QITSVLTCKYSSTVPRRELVPLLSALHQLLAEQRRGERSLYVLRCLREVALCQARCPHKA
QAHKAELDRLWARIWALGVRGVGSPHTESLSLDLLASIVHGGLVNVDREFWKLFSGSACK
PSKSSALCLTHTILKCPVPKSVTSSSIWDSLGATEGSPSPFLKENLIAWLLLSNQNDETE
DSSRPHPIICRDFPHNLIANILVSLTLKDTRVGLKFLLGTEGVASGSSRDQVASEAKENL
EEIETLYLHFSFNASEIPARANEPAPSADCQFPAVLGLRNKLEQLVLSVADSLLNCYSPD
SPSVPPECLVRCCALLIGVLAGYVSTGCVTQDEACCSRLFTKAKALAQELSGFVSSVKVK
MSDEGAMSSLRSVMKLCTQSASRKPVVHVNAVSSGLFVLALPASLISESAEICKLLLNSW
SKKVDDDEQMEEDWEMTKVQPAGDDHDLFDDGEGSSSFNGANRQKGDGADTSCRPGAKCL
LAEENLSQQDTALLAVLAFLCECGSVPPVHGLLFKPHEVRRRLLLFLEQMDFGKALHLNM
YLVLLKNLPAEDSLSAEEFDLLLRPLADLCGLYRQDQEICVAVLLSLLPSIKSLGRTRPV
LEDMKHVQGCLLQVVSGFCFLSKSGKCSASVRAALVRCLVALLEADPHCNWAILSLRGDE
GEEERLLSSVLPSYLADADHYVRMQVATSVERLFLEMKPEFPKMREMMPLKHQQKAFEHI
YLKAQEGMKLPGNNHLKDEQDEGFNRKATLLKSLSVVLCCSPVCEKQCLFALFQSYKENN
LEEQLIKKVLFSVSKVLGYKSVKSFVTSHLNYLVAEWLAQRQSDDRYTLGSFPYSLLDHD
SVKDFYSSTYQVLIPRLVFLDDFEQVKSIGRCLEKDWRLLLANCFPKIMVNILPYFALPG
QDPQAATQREKAHKVYDLLKDGSCLGKQQIDSLIHSNLADIVVELLMTLCEPSGVEADCG
GLKRFIGELDPAPNPPCFSSDVITATMDYLSKCHSANHRSLVAILSKTPISIQRILLAVC
ERAAETTNGYERHRILLMYHLFVSLLLGEVKDGLGGAWAFVLRDVIYTLIHHINSRPTEY
DEVSQRSLSLCCDLLTSVCQAALQFCDGALDCHLQVIVGTLTAQVTSRPVISKQVLSLLQ
FLIIENQQKLKGAIQSLEPFPNLPDFKELRSVQHKLKYNDGTFTLRQEITHFLSVASCDS
LPLTRLEGLKELTRQLHLNKEQLRDLLKECHADPSDSVLVKLILRLLQLCKLAVNHPGGA
EILEAAGSCLGELGPVDLSTIALLHGRDALYNQAVALFSSTESQSLYIILNCMNEALTQQ
RIEVKKAAAQCVKGILATQAGVDFWDLHKSNRDPMLAYLNPFRTAKNKLSALSVVESLEA
KAKLESQEFWIPQTGSHQTWLKELCTALLDSGGVRSQPLLLSRDLCLVSGDHCQRLLPLI
IHSILLDDPSGSWRELLSSHIQEFFSFCARNAQAASRSATPLIPDNESPAPTQNSCDKSS
LRTMLAAIDYLRHQQRPLDSKRNSGGTVCDSNFWLDLNYLVVAKAAQSCLAHFTALLYTE
IYVDKIKANMEETCRTKSRASRKINFEANSQTLTISSLTEKSVEDVSINLQELLIEVYRS
IGDPDSLYGCGGETMNSPLIRIRTYEHEALWGKALTSYDLHTTLPEVTRQVGIVEGLQNF
GLSNILATYMRGLESEGVEWGAELRELRFQAAWRNSQWDCELAERSEKSVPGFHESIFCS
LQALRDKEFSMFDETLKQARRAEVEELCRDSLEAVSSLYPALRNLQSIKELESFKQLFSR
PFSDLALSNICRQWRQHSHLLADSDFAVVEPILAVRSVAQHALLSKLGNLNSTNLSSALT
DHLMELCCLARKAGNTQLAERAVHQMKIQGGAGSSWQLQEAQVSWAKGEQGLALGQLRQM
IHSLEDKVDFDPDVVPAYTESLRLCGNWLAETCLESPGVILEKYLERAVELVEGERGAQD
SRLQSQQTEAFLSLARFSDAQYQSIDKYMNSSEFENKQALLEKAKEEMNLMRQHKVTSNR
YTIKVQRELELDEKALSNLRTDRQRFLCKAVENYIRCLERGEEHDTWVFRLASLWLENAD
IKVVNNAMKKGVKQIPSYKFLPLMYQLAARMGTKMANGTSEDTGFHDVLHDLICRASLEH
PHHTLFIIFALVNANKDENFGKTRLSMSAPRQLTPFDQERSQVAQKIINVIRKKRAEMIR
GIERLCDAYITLAYMDASRHKTEKKAIPIPADQPIMQIRNLEEVIIPTMEMKVDPSGCYD
NLVTVRSFLPHYHLAGGVNLPKIIDCVGSDGKSRRQLIKGQDDMRQDAVMQQVFSMCSML
LQRNKDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTMPIGEFLTEPNKGAHKRYRPQDWTS
LACRKKMMEAQSLGFDYKLEAYMNVCKNFRPVFRYFCMERFLDPALWMERRLAYTRSVAT
SSIVGYIVGLGDRHIQNILIDEETAELVHIDLGVAFEQGKILPTPETVPFRLSRDIVDGM
GITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLYDPLFDWTMNPLKAFHLQHDEQQDL
NATLGSTMGGVDINDHHKSSDSQSFNKVAERVLLRLQEKLKGVEDGAVLSVGGQVNLLIQ
QAMDPKNLSRLFSGWQAWV
NT seq
9240 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggctctacatgatttactgctctgctgcagagggctggaacatgataaagct
actgagagaaagaaagaagctgaaaacttcagacggctccttcgatctcctgcagttttg
caagaactggattgtgcctcattggccaaagccaaagtctccaagcagctcacatgggac
aatgtcttcaggttcctgcagcattatgtccagaaggagatggaaagtattcaatcaagt
agatccaatgtgacggcaaccacgctggctatacggcagaagaagatggctgaagtgtgc
agcttgattaagtactttattcgttatgcaaacaaacgcgggcctcgtctgaattgcagt
gagctgctgaaacacgtgacagaggttctgcagagctcccactgctgcacagcgtacgga
gaaaattacagcagcatccttttaaaggacatcctcaccgtccgcaagtactggtgtgac
atctctcagaagcagtggcagaatctgttggatttgtactgtggcttttttaactcttcc
tccagatccatcaaccgtgtgttgctcagcagagtcatccacacgttggtgcggggctgc
tgcacgcagaccgacgccttcaccgacgctctgttcggctttttcaccaaagctctgctt
aatgccaggcaggagaaacacctgccggtcttggagcatttagtctcagctctgaacgtc
ttcctgaggtcggcggccgtcaactgcaggatgagagcgtgtcgcctgggggaggagctg
ctgccctctgtgctgtatgtgtgggcagatatgaggccaagtgcaccactcaaagaggag
attgtggactttttgaacctccagatgtgtgttcaccaccctaaaggagccaaaacacac
gacacaggtgctcacgctgaagactggacgaggtggcgtggtctgctgtacagcctgtac
gactccttggtcagagagatcagccagataggcagcagagggaagtacgccacagggagc
cgacacgtagctgtcaaagacaatctgatcgagctcacggctgacatctgtcaccagctg
ttcactgatgacagtgggagccatacgttggaggtcacgcaggccccccacagggccacg
cagatgggaagtccctcccacggtgcagccagtaaacgtcggcgcattgaaatgggctgg
gaagtgctcctcgaacgtctgcagcctcaatccgatgactttgacatcatcccttggttg
cagattacctcagtgctcacctgtaagtactcgtctacggtgcccaggcgggagctggtt
ccactgctgtcggcgttgcaccagctcctagcagagcagcgcagaggtgagaggagcctg
tacgtgctgcgctgcctcagggaggtggcactctgccaggcccgctgcccacacaaagcc
caggcccacaaggcggagcttgaccggctctgggctcgcatttgggccctcggtgtgcga
ggtgtcggctcaccccacacagagtctctcagcctggatctgctggcctccattgtgcac
ggcgggctggtgaatgtcgaccgagagttctggaaactcttctctgggtctgcatgcaag
ccatccaagagttctgctctttgtcttacccacacaatcctcaagtgtcctgtcccaaaa
agtgtcacgtcgagctccatctgggactctttgggagctacagagggatctccatcccct
tttttgaaagaaaatcttattgcttggctgctgctgagcaaccagaatgatgagaccgag
gacagcagcaggcctcatccaatcatctgcagagattttcctcataatctgatagcaaat
attttggtctcactgacactgaaagacacaagagttggcttgaagttcctactgggtaca
gagggagttgcaagcggctcttctcgagaccaagtagcatccgaggccaaagaaaacctg
gaggagattgagacactctacctgcactttagctttaatgcgtcagagatcccagcacgc
gccaacgagccggcgccgtcagccgactgtcagtttcccgccgtcctcggcctccgaaac
aagctggagcagcttgtgctttctgtggcggacagcctgctcaactgttattctcctgat
tctccgtccgttcctccggagtgcttggtgcgctgttgtgctctgctgattggtgttctg
gcgggctacgtctctacgggatgtgtgactcaggacgaggcctgctgctcccggctcttc
actaaagcaaaggccttggctcaggaactcagcggctttgtttccagtgtaaaagtgaaa
atgtcggacgaaggcgccatgtctagtctcagatcggttatgaagctgtgcactcagtcc
gcaagcaggaaacctgtggtccacgttaatgccgtctcctctggtttgttcgtactggct
ctaccagccagcctcatcagtgaatcggcagaaatctgcaaactgctgttaaatagttgg
tccaaaaaagtggatgatgatgagcaaatggaggaggactgggagatgactaaagttcag
ccagccggggacgaccacgacctttttgatgacggtgaaggttccagcagcttcaacggc
gccaacaggcagaaaggagacggtgctgacacctcctgccgcccgggtgcaaaatgtctg
ctggcagaggaaaacctgtcgcagcaggacacagctctcctggcagtcctggcgttcctg
tgcgagtgcggttccgtcccgcctgttcatggtctgcttttcaagcctcacgaggtgcgg
cgccggctgctgcttttcctggagcagatggatttcggcaaagccctgcacctcaacatg
tatcttgtcctgttgaagaaccttcctgctgaagactcgctctctgcagaggaattcgat
ttgctgctccgtcctctcgcggatctgtgcggtctgtatcgtcaggatcaggagatctgt
gttgctgtgctgctcagtttgttaccctccataaagagcctgggaagaactcgccccgtg
ctggaagacatgaaacacgtccaggggtgtctgctgcaagtggtgtctgggttttgcttc
ctaagcaagtcaggaaaatgttctgcgtctgtgagagcagctttagtgaggtgtcttgtt
gctttgcttgaggcagacccacactgtaactgggctattttgagcctcagaggggatgaa
ggggaggaagagcgtttgttgtcttctgtccttccatcttaccttgcagatgctgaccac
tatgtccgcatgcaggtggctacatccgtggagaggctgtttctggagatgaaaccagag
tttccaaaaatgagggagatgatgccgctgaaacaccagcaaaaagcttttgagcacatt
tacctgaaggctcaggaaggaatgaagcttcctggaaacaatcatttaaaggatgagcag
gacgagggcttcaaccgaaaggccaccctgctgaagagtttgtcggtcgtgctgtgttgc
agccccgtttgtgaaaaacagtgtctgtttgcacttttccagtcctacaaagagaacaac
ctcgaggagcagctcatcaaaaaggttttgtttagtgtgtcgaaggttctgggctacaag
agcgtgaaatccttcgtcacctcccacctcaactatctggtagctgagtggctggctcag
aggcagtctgatgaccgctacactcttggctcttttccttacagtcttctcgaccacgac
tctgtcaaagacttctacagctccacctaccaggtgctgatcccccgcttggtcttctta
gacgactttgagcaggtgaagtccatcggcaggtgcctggagaaggactggaggcttttg
ttagccaactgcttccccaaaatcatggtcaacattctgccgtactttgcgctgcctggc
caggatccacaggccgcaactcagagagagaaagctcacaaagtgtacgacctgctcaag
gacggcagctgtctggggaagcagcaaattgacagcctgatccacagtaacctggccgac
atcgtggtggagttgctcatgactctgtgtgagccgagcggagttgaagcagactgtgga
ggcctgaaacgcttcattggagagctcgatcctgcaccaaaccccccctgcttcagctct
gatgtcatcaccgctacgatggactacctcagcaagtgtcacagcgccaaccacaggtcc
ttggtcgccattctgtcaaaaacgccgatttctattcagaggattctattggcggtgtgc
gaaagagcagcagagacaactaacggctacgagcgccaccgcatcttgctcatgtaccac
ctgtttgtcagcctgctgctcggggaggtgaaagacggcctggggggcgcctgggccttc
gtcctccgagacgtcatctacaccctcattcaccacatcaacagcagaccgacggagtat
gacgaggtttcccagcgcagcctctccctgtgctgcgacctgctgacctctgtgtgtcag
gcggcgctgcagttctgcgatggtgccttagactgccacctgcaggtcattgtggggact
ctaacggcacaggtgaccagtcggcctgttatctccaaacaggtgttgagtttgttgcag
tttctcataatagaaaaccagcagaagttaaagggagccatccaaagtttggagcctttt
cccaaccttcctgactttaaagaactccgttctgtgcagcacaaactcaaatacaacgac
ggcaccttcacgctgagacaggagatcacccacttcctgtcggtggcctcctgtgactcc
ttacctctgaccaggcttgagggtcttaaggagctgaccagacaactgcatctcaacaag
gaacagcttcgagatctgctgaaagagtgccatgccgacccctctgacagcgtgctggtc
aagctcattctccgtctgttgcagctttgtaagttagcggtcaaccaccccggaggagct
gagattctcgaggcagcagggagctgcctgggagagctgggtccagtcgacctctccacc
attgcactccttcacggcagagatgctctctacaaccaggcagtggctctgttttcctct
acggagtcacagagtctttacatcatcctcaactgcatgaacgaggcactcacacagcag
cgaattgaggtgaagaaggcggcagctcagtgtgtgaagggtatcctggccacccaggct
ggagtggacttctgggacctgcacaaaagtaaccgcgaccccatgctggcgtacctgaat
ccattcagaacagccaagaataagttgtcagctttaagtgttgtggagagtttggaggcc
aaggcaaagctggagagccaggagttttggattccccagacgggcagccaccaaacctgg
ctgaaggagctttgcaccgctctactcgacagtggaggcgtcaggagccagcctttgctg
ctctcacgagacctatgtctggtcagcggggaccactgccagaggctgctccccctcatc
attcactccatccttctggatgacccctccggttcctggagggagctgctctcctcccac
atccaagagttcttcagtttctgtgcaagaaatgctcaggctgcaagtcggtctgccaca
cctctcatcccagataatgagtctcccgctcccactcagaactcatgtgacaagagctct
ctgcggaccatgctggctgctatcgactacctgagacatcagcagagaccgcttgattct
aagaggaactccggtggaacagtgtgtgactcaaacttttggctggacttgaactacctg
gttgtggccaaagctgctcagtcctgcttggcgcacttcaccgctctgctctacacagag
atctacgttgacaagatcaaagccaacatggaggaaacttgcagaaccaagtccagagca
tcacgcaaaattaactttgaagcgaacagtcagaccctcaccatctccagtctgacggag
aagagtgtggaagacgtcagcatcaatctgcaggagctgctgattgaagtttatcgcagc
atcggcgacccggacagtctgtacggctgtggaggagagacgatgaacagcccgttgata
aggattcgaacctatgaacatgaggctttgtggggaaaagctctgacctcatacgacctt
cacaccactctacctgaggtcactcgacaagttggaattgtggagggcctgcagaacttc
ggtctgagcaacatcctggccacttacatgagaggtctggagagtgagggggtggagtgg
ggagctgagctgcgagaacttcgcttccaagctgcttggaggaacagccagtgggactgt
gagctagcagagagaagtgagaaatccgtccctggctttcatgaatccatcttttgttct
ctgcaagcactgagggacaaagagttctccatgtttgatgaaacgctgaaacaggcccgg
cgtgctgaagtggaggagctctgcagggacagtctagaggccgtgtcttctctgtatcca
gccctcagaaacctgcagagcatcaaggagctggagagtttcaagcaactcttctccagg
cctttctctgatctggctctgagcaacatctgccgtcagtggcgtcagcactcccatttg
ctagccgacagcgacttcgctgtggtggagcccatactggcggtgcgctctgtggctcaa
cacgctctcttatccaaattgggaaacttgaacagcacgaacctcagttctgcgctcacg
gaccatctcatggagctctgctgtttggctcggaaggccggaaacacccagcttgcagag
cgtgcggtccaccagatgaagatacaggggggagcggggagctcgtggcagctgcaggag
gcccaggtttcctgggcaaagggagagcagggtctggctctgggccagctgagacagatg
attcacagtctagaggacaaggtggattttgaccctgatgtggttcctgcgtacaccgag
agcctcagactttgtgggaactggctggctgaaacctgtctggaaagtcctggagttatc
ctggaaaaatacttggagagggcagtggagctggttgaaggggaacgtggagctcaggac
tcccggctccagagccagcagaccgaggctttcttgtctctggctcgcttctccgatgct
cagtatcagagcatcgacaaatacatgaactcctctgagtttgagaacaagcaggcactg
ctggaaaaagctaaagaggagatgaacttgatgagacagcacaaagtcacctccaacagg
tacacgataaaggtgcagagagagctggagctggatgagaaggccctgtccaacctgcgg
acagacagacagcgcttcctgtgtaaggcggtggagaactacatccgctgtctggagcga
ggcgaagagcacgacacatgggtgttccgcctggcgtcgctctggctggagaacgctgac
atcaaagtcgtgaacaatgccatgaagaaaggagtgaagcagattccctcctacaagttc
ctgccgctcatgtatcagctggccgctcgcatgggaaccaagatggcgaacgggacctcc
gaggacacgggcttccatgatgtccttcatgacctgatctgtcgggcttccctggagcac
cctcaccacacactcttcatcatcttcgccctggtgaatgccaacaaagacgagaacttt
ggcaagactcggctgtccatgagcgctcccaggcagctcacaccttttgaccaggagcgc
tcccaggtggctcagaagatcatcaatgtgatcaggaaaaagcgtgcagagatgatccga
ggcattgagcgcctgtgtgacgcttacatcacgctggcttatatggatgctagcagacac
aaaaccgagaaaaaggctattcccatcccagccgaccagcccatcatgcagattaggaat
ctggaggaggttataatcccaacaatggagatgaaggtggatccgtctggttgctatgac
aacttggtgactgtcaggtccttcctgcctcactatcacctggccggaggggtcaacctg
cctaagatcatcgactgtgtgggctcggatggcaagagcaggagacagctgatcaaaggt
caggacgacatgcggcaggatgcagtgatgcagcaggtcttcagcatgtgctccatgttg
ctgcagcgcaataaggacactcggaagaggaagctgaacatccgaagatacaaggtggtg
ccgttctcgcagcgcagcggcgtgttggagtggtgctccggcaccatgcccatcggggag
tttctaacagaaccgaacaaaggagcccacaaacgctaccgacctcaggattggaccagc
ctggcctgtcgcaaaaaaatgatggaggctcagagtctgggattcgactacaagcttgag
gcctacatgaacgtttgcaaaaacttcagaccggtcttcaggtatttttgcatggaacga
ttcctagaccccgcgttatggatggagagacgactggcttacacccgcagtgttgccacc
tcctctatagtcggctacatcgtcggtctgggcgacagacacatccagaacattctgatc
gatgaggagactgctgaactggtgcacatcgatttaggagttgcctttgagcaggggaag
atcctccccacccctgagacggttcctttcaggctctccagagacattgtggacgggatg
ggcatcacaggagtggagggagttttcaggagatgttgtgagaagacgatggaagtgatg
aggagctctcaagaagctctgttgaccattgtggaggtgctgctgtacgaccctctgttt
gattggaccatgaaccctttgaaagccttccacctgcagcacgacgagcagcaggacctc
aacgccactcttggctccacaatgggaggtgttgacataaacgaccatcataaatccagc
gacagtcagagcttcaacaaggtggcggagcgggtgttgctgcgcctgcaggaaaagctg
aagggggtggaggatggagcggtgctgagcgtgggcggacaggtcaacctgctcattcaa
caagccatggaccccaaaaacctcagcagactcttctcgggatggcaggcctgggtgtag
DBGET
integrated database retrieval system
