Oryzias latipes (Japanese medaka): 101168166
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Entry
101168166 CDS
T02443
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101168166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101168166
Membrane trafficking [BR:
ola04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101168166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
UPF0242
DUF4635
End3
Motif
Other DBs
NCBI-GeneID:
101168166
NCBI-ProteinID:
XP_023807323
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All DBs
Position
22:25720011..25748652
Genome browser
AA seq
1190 aa
AA seq
DB search
MSSLMVEGEQQWVPTHVLVTVLRGRGLQGKSKHGTSDAYAIIQLGKEKYSTGVAEKTTEP
EWGEECTFELQPDALESGRLVLTVMHRGLVVQDVFLGQAVIQLGEVFHQSRCLKNHWYRL
QSKSGKKEKERGDIQVTIQFTRNNLTASMYDLLMKEKGASPFTKLKERIKGKRRSSQDDA
SSAVLPGGYASLYRLRQRMPSDGGGEEDYEDDEGGEVRRSKMRTFFFRGKLRKTSDTRSS
TSVGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTANTSPDSTSLK
PEFGDETGEISIAVPQQFVFANGSHAPLIQPQDPGLGKPACGGGLLQKSLPVSVSLQNLS
TRASMDLPKGPAGDGRRWSFDRASTEEKAAMAAALEGGGPMRVKDTPEAANTFSEVESDC
KGKQQRRDLITPGRSEPGRGQTSSRNEPEQVSSGAGEKVRSWFGSKDKPSLGVSHILKPS
TDPHPPLFLPNPPPGGVSVDGSSVFPPLQHANPFPHADLSSCNPFHSVLQHNPFYEDILS
TRASTPPLPPLPYLSSSCPPMTHLMPQPSSSNPTLAHDSPTMEDPFADAQTEGMTTATRG
PPPPSAAPPPRNSSNPFRRADRPQDDVESQWDQSFEAFAAGRLQSPVGPDLRTQESVVGT
SWFSRGEPGAFRSDDRALNPANSHALSACTETKRNSSTNTSAAPSHSAGTPFSGSSSGPG
VLADGGLFWFSQPDRSSSKKPETPCELGSAYSKDATTYGSHGKTQTDPEEPQLDQENRAR
SMEVPDGSTWDSPVNNSTGVQILGSNDDPSFFLPSYIFTSSPHAQQGLLDHRHGGLREQG
SDLHSGLTHFPGFTSTPDSQQGFTDAQTLDHSGTSLFPSLYVSAESQDYQTCRSPPSLNP
SGPSEPNQTVSKNSLLWGEGGDFHTTADETLALETSITERHKSQHSFISSGLKSPPEGGG
EVQHADSTDPRSQKLKLQRSRSEGTLAPPTPSFESDAVSRRRSSLAPEGSRLLSLTPPAP
QSISFPVALPPCANLSVRDASNPSPEGAEQQAVVQRDSPHPVKPLTATAPPEEERSKLAS
GLEKLKSTIHPGRGSHLTEQEDKKKILTGGAGSYYHLTHSQLVALLVQREAELQRHQEEF
KNQKLLLAKREAELKKLKPQVRDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaatggtggagggggagcagcagtgggtaccgacacacgtcctggtgacg
gtgctgaggggcagaggcttgcagggcaagagcaagcacggcaccagcgacgcctacgcc
atcatccagctggggaaggagaagtactccaccggcgtggcggagaagaccaccgagccg
gagtggggagaggagtgcaccttcgagctgcagcccgacgcgctggagagcgggcggctg
gtgctgactgtgatgcaccgggggctggtggtccaggacgtgttcctcgggcaggcggtg
atccagctgggcgaggtgttccaccagagcagatgcctgaaaaaccactggtacaggctc
cagtccaaatcagggaagaaggagaaggagcggggggacatccaggtcaccatccagttc
acccgcaacaacctgaccgccagcatgtacgacctgctcatgaaggagaaaggagcgtcc
cccttcactaagctgaaggagcgcatcaagggaaagaggaggtccagccaggatgacgca
tcatctgccgtcctacctggggggtatgcctctctgtaccgcctgcgccaaagaatgcca
agcgacggaggtggggaggaggactatgaagatgatgaggggggtgaggtccggagaagc
aagatgagaacattcttcttcagggggaagctgcggaaaacgtcagacactcgctccagc
acgtctgtgggctctgagagcagtgagtcttcgtcacgaggggggagcctcagtcctacg
gccggcatcagcgtggtggtgtcggacctctccaactcacccagcaacagcagcaacctg
actgcagacaacagtccagagcatacggccaacacgtctccagactcaacctccctcaag
cccgagttcggtgatgagaccggtgagatcagcatcgctgtgccgcagcagtttgttttt
gcaaatggaagccacgcccccctcatccagccccaggaccctggccttggaaaaccggcg
tgtggcgggggtctgctgcagaagtctctgcctgtgtccgtgtctctgcagaacctcagc
acgcgggcgtccatggaccttcccaaaggtcctgcaggggacgggcgccgctggtcgttt
gacagagccagcacggaagagaaagctgccatggcagcggctctggagggaggcgggcct
atgcgggtcaaggacacgccagaagctgccaacactttctctgaggtggagtcagactgt
aagggaaaacaacagaggagggacctgatcacgccagggcggagtgagcctgggaggggt
cagacatcgtctaggaacgagcctgagcaggtttcttctggcgctggggagaaggtcagg
agctggtttggatcaaaggacaaaccaagcctgggggtgtcgcacatactaaagcccagc
actgacccacacccacccctttttctacctaacccaccccccgggggtgtttctgtagat
ggtagctctgtgtttccccccctgcagcacgctaaccctttcccccacgctgatctctct
tcctgcaacccgttccattctgtcctgcagcacaaccctttctatgaagacattctttct
accagggcctcaacccccccgctgcctcctttgccctatctttccagctcctgccccccc
atgacccaccttatgccccagccaagtagctctaaccccaccttggcgcatgactcccca
accatggaggaccccttcgctgatgcacagacggaggggatgaccacagctaccagagga
cctcctccacccagtgcagcacctcctcccaggaactcatcgaaccctttcaggagggct
gaccgaccacaggatgatgtggagtcacagtgggaccaatcttttgaagcatttgcagca
ggaaggctgcagtctccggtgggcccagacttaagaacgcaggaaagcgtcgtgggaacc
tcctggttctccagaggagagcccggagccttcaggagcgatgaccgagctttgaatcct
gctaactctcatgctctgtctgcatgcactgaaactaaacgcaacagcagcactaacacc
agcgcagccccctcccacagtgctggcacaccgttcagcgggagctcctccggacctggt
gttttggcagacggtggtcttttctggttctcccagcctgacagatcctcctcaaagaaa
cctgaaacaccctgtgagttggggtctgcttactccaaggacgccaccacttatgggtcg
catggaaagactcagacagacccagaggaaccacaactggaccaagaaaaccgggctagg
agcatggaggtcccggatgggtccacttgggattctcctgtgaacaacagcacaggagtc
cagattttgggttcaaacgatgacccgtcttttttcctgccgtcctacatcttcacctcc
tcgcctcatgcccagcagggtctgttggaccaccgccatgggggactaagagagcaggga
tcagacctccactcaggtttgacacattttcctggtttcacttccaccccagactctcag
cagggttttactgatgcacagactttggatcatagcggcaccagcttgtttccaagtctg
tacgtaagcgcagagtcccaagattaccaaacctgccgttctccaccatccttgaaccca
tccggcccctcagagccaaaccaaaccgtctccaaaaactctctgctctggggtgaagga
ggtgactttcacacaaccgccgatgaaactttggctttggagaccagcatcacagagagg
cacaaatcacaacattccttcatcagctccggtctgaagagtcctcctgaaggaggtggg
gaggtgcagcacgctgattcaacggacccacggtcacaaaagctgaagctgcagcgctct
cgatcagagggcactctggctcctcccacaccctcttttgagagtgatgctgtttctagg
agacggtcctctttggctcctgagggcagccgcctcctctctctaaccccccctgctcct
caaagcattagcttccctgtagccctccctccctgtgcaaacctttcagtgcgagacgcc
tcaaacccgagtccggagggggcagagcagcaggcggtcgtccagcgggacagcccccac
ccggtgaagccgttgacggccactgcccccccagaggaggagcgctcaaagctggccagc
ggcctagagaagctcaagtccacaatccacccggggaggggaagccacctgacagagcag
gaggacaagaagaagattctcacaggaggggcgggctcgtactaccacctgacccacagc
cagctggtggctctgctggtccagcgggaggcggagcttcagaggcatcaggaggagttt
aagaatcagaaactgctgttggccaaacgggaggcggagcttaagaagctgaagccacag
gtcagagacctggaggactacatcgacacgctgctggtgcgcatcatggagcagaaaccc
accctcctgcaagtgcgctccaagctcaagtga
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