Oryzias latipes (Japanese medaka): 101168560
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Entry
101168560 CDS
T02443
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101168560
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101168560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
101168560
NCBI-ProteinID:
XP_023817152
LinkDB
All DBs
Position
13:711389..762125
Genome browser
AA seq
1850 aa
AA seq
DB search
MRLPLLCVWAGWMLMVSGDAQREDGGAPAARESRRSGWRRESSRGAGDPDGGSRRTAGGP
HVPGPPCCIRWSLSTQTRKCIKARCPPPCRNGTSCRQPNTWWCRPGFHGNRCRLSAAARS
PTRATPTRTGTTPGSQVKRLLTRATEEDTGSDPVRSGSSGAAALGRKEKRGRVLKKLGSP
EETQTSSGGPGLTREGPSSEKASLHPKVEERRSGPKRLEQKLSPGPNGGRVLTAGRRRWE
EKKRREVKQKPSLREVQWMLQRKTSGPGGPGGGMATLLMKHIAKEKRRLHSLTSSNSSRK
TFSQRGQESISTPTGGGRGRDRIRVMFTPTICKVRCSQDRCVNHCERGNATTVYSSSSGE
GGAGVRDGSHGPGFRVFLCPLLCKNGGVCIQQDRCLCPANFTGKFCHIPVTPEAHFTAGR
TSSINEIIKPALLSAATTNQDLTHSEFLLPLGQNQEAQRPGVPASSMVKVRVQHPPEASV
KVHQVVKVSGSGPTQRALSSFSSGSAGAPAPSPDLSTAPPSTGSSGVQAQTVRGGGTYTQ
HSGFKYCFREVRDGQCSSPLPGLRSRDVCCSGMGKAWGLTDCVLCPKNAGQSNSSCPAGF
GRVNGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRVGFILDATHGVCISHSVISEEKG
QCYRVLDQGRGPSSCSLPIARNITKQICCCSRVGKAWGADCQRCPHFGSVSFKEICPAGP
GYHYSASTLQVTQRVSEHLDPTGTESGSSSSRTSISQQKPSSSGTTSSSFSSFGARPSPP
HLEIRPRPEPRPTAGSPRQPASGGAIVLQGKPAVQQTQPGSSVSQLAQARPQSPSGGTQG
SQPSFRSQPSQFPSGGDLFPPAVLPKNPANPTARPARVQPLKGVCETRPGVCGRGHCLDL
PGGKHSCLCESGYEHGPQRTTCQDVDECLQNPCSNSRCENTPGSYRCVCRHGYRLSGNTC
TDVDECVDPLRCPGQECVNTLGSYRCTSCQPGYGLLNGLCTDIDECRQSPCSNARCENTP
GSYRCVCRPGYRLQNDTCADMDECAEPSRCNGQMCVNSAGSYRCVSCRSGYKLTNRQCTD
VDECESAAACEADRRCVNTAGSFRCECLPGYQASSLGRQCRDINECLEGDFCFSGGECLN
TPGSYMCVCSQGFTLSSNGTACKDVDECLKPGVCSDGRCVNTDGSFHCRCANGFASNPER
TACLDVDECISSNGSVCGSQRCENTIGSYRCLTSCEAGYRVQPDGSCADEDECASQPGVC
GTARCENLKGGFVCRCDITGQVFEATSRRCVSAAPRLTETGRGTQILSSAFSSAFHVRMV
ELAPPLLAPTPPPVSAPTPLPEARPGELRECYYNLANRGSCSLLAANTTQQECCCTVGEG
WGLGCQYYTCPPANTAEFLALCLSGRGYVTAGPGVFNYRDVDECKRFQPQVCKNGVCVNN
IPGYRCYCYSGYVYNSTLLECVDHDECEEETCVGGVCVNTVGSYYCTCPTHLVLDETQRN
CVNSSHSSMDENLSVCWQHVSADLLCQSPLLGGQVTFTDCCCMYGEGWGMGCALCPSSDS
EEYAALCSSFAPPFPDSYPEPPGPETRLLLESGRGAPPYGSDLYTRTLVPSRDFSRPDYD
DYSPAGGVRSGFGGRTPGTSSLPEDAYRPSDYSSYYSEGDYSSPDSSAPQTPSFRLPPDP
RSEIGFGARPFPPSRPDGPPLSLAPLPGSPYDDQEEEDEMTWRPSPPFPPFTDRNRGGGG
AGGRGAPRRLYERRYELYAGLSAAEDCGILHGCENGRCIRVAEGYTCDCYHGYELDMTSM
TCIDVNECEDGVGLEFPCVNARCVNTEGSFRCVCRRGYVVSRRRNHCVAA
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcccgctgctgtgcgtttgggctggatggatgttgatggtgtccggcgacgcg
cagcgggaggacggaggcgcaccggccgcccgggagagccgccggtccggctggaggagg
gagagcagccgcggagcaggagatccggacggagggagcaggagaaccgcgggcgggcct
cacgtccccggacctccatgttgcatcaggtggagtctgtcgactcaaaccaggaaatgc
atcaaagcgcggtgcccccctccctgcaggaacggaacgtcatgccgacaacccaacacc
tggtggtgcaggccaggtttccatgggaaccgctgccggctttccgccgctgcacgctct
ccaacacgtgccacgcccacccggaccggcaccacacctggttcacaggtgaagaggctt
ttaacccgagccactgaagaagataccggttctgacccggtcaggtcaggaagttcagga
gctgcagctttgggcaggaaagagaagcgggggcgagttctcaagaagcttgggagtccg
gaggagacccagacctcctcaggaggtccgggtttgaccagagaaggtccttcttctgaa
aaagccagtcttcaccccaaagtagaggagagaagatctggacctaaacgcttggagcag
aaactgagtcctggaccaaatgggggccgagttctaacagcagggaggaggaggtgggag
gagaagaagaggagagaagtgaaacagaaaccaagtctgagggaggtccagtggatgctg
cagagaaagacctccggacccggaggacctggaggcggcatggccacgctgctgatgaag
cacatcgcaaaggagaaaaggaggcttcacagtctgacctcctcaaactccagccgcaag
accttctcccagcgggggcaggagtccatcagcacccccacaggaggggggagaggacgg
gaccggatccgggtcatgttcacgccgaccatctgcaaggtgcgctgcagccaggacaga
tgtgtcaaccactgcgagaggggcaacgccaccactgtgtacagcagcagcagcggcgaa
gggggagcgggcgtgagggacggctctcatggaccgggattcagagtctttctgtgtcct
ctactctgcaagaatggaggggtctgtatacagcaggatcgctgcctctgtccggcaaat
ttcactggaaagttctgccacatacccgtcacgccagaggcccactttacggcaggcagg
acctcctccataaacgagatcatcaagcccgccttgttgtctgctgcaacgaccaatcag
gacctgactcactctgagtttctgctgccgcttggacaaaaccaggaggcccagcggccc
ggcgtccccgcctcctccatggtgaaagtcagagtgcagcacccacctgaggccagcgtg
aaggttcaccaggtggtaaaggtgtcgggatccggtcccacacagagagccctttcctcc
ttctcctctggatcagcgggcgccccggcaccatctccagacctgagcacagctccgcct
tctacaggaagcagcggggtgcaggcccagacagtgagggggggcggtacctacacccag
cactccggcttcaaatactgtttccgagaagtcagagacggacagtgcagttccccactt
cctggcctgagaagcagggacgtgtgctgctctgggatggggaaggcgtggggcctcacg
gactgcgtcctctgcccaaagaacgcaggtcaaagcaacagcagctgccctgctggcttt
gggcgcgtcaacggaacgcagtgtgtcgatgtgaatgagtgcctccagccggggctgtgt
gagaacggcatctgtgtgaacaccagggggagctatagctgtgtgtgtagagtggggttc
atcctggacgctactcacggagtctgcatttcccacagtgtgatctcagaggagaagggt
cagtgctaccgggttctggatcagggccgggggccgtcctcctgctctttgcctatcgcc
cggaacatcaccaagcagatctgctgctgcagtcgggtcggcaaagcctggggcgcagac
tgccagaggtgtcctcacttcggttcagtgtcctttaaggagatctgtcccgctggtccg
gggtaccactactccgcctccacccttcaagtcacccagagagtctcagagcacctggac
cccacaggtacagaatccgggtccagcagcagcagaacctccatctcccagcagaaacct
tcttcctcgggaacgacctcctccagcttttcatcctttggcgccagacccagtccacca
catttggagatccgcccccggccagagccccgcccaacagccggttctcctagacagcct
gctagtggtggagccatagttctgcagggaaaaccagcagtccaacagacacaacctggt
tctagtgtgtcacagttagctcaggcaagacctcagtctccatctggaggaactcaaggc
agtcagccctccttcaggtcccaacccagtcagttcccatctggaggagatcttttccct
cctgcggtcctgcccaaaaaccctgcaaaccccacagcgcgacccgccagagtccagcca
ctcaaaggtgtctgtgagaccagaccaggtgtgtgtgggcgtggccactgtctggatcta
cctggtgggaaacactcctgtttgtgtgagtcggggtacgaacatggtcctcaacggacg
acctgtcaggacgtggacgagtgtctgcagaacccctgcagcaacagtcggtgtgaaaac
acaccgggcagctacagatgtgtgtgtcgtcatggttacaggctctctggcaacacctgc
acagacgttgacgagtgtgtggatcctctgcggtgtcccggtcaggagtgtgtcaatacc
ctgggctcgtaccgctgcacgtcctgccaacccggctatggcctgctgaacgggctctgc
acagacatcgacgagtgccgccagagtccatgctccaacgctcgctgtgaaaacactcct
ggaagctaccgctgtgtttgtcgccccggttaccggctgcagaacgacacctgtgcagac
atggacgagtgtgcggagccgtcccgctgtaacggacagatgtgcgtgaactctgcgggg
tcctacaggtgtgtgtcgtgtcgctccggatacaagctgaccaacagacagtgcacagat
gtggatgagtgtgaaagcgcagcagcgtgtgaggcagaccggcgctgtgtgaacacagcg
ggctccttcaggtgtgaatgtctgcccggataccaagcctccagccttgggaggcagtgc
agagacatcaacgagtgcttggagggcgacttctgtttctctgggggggagtgtctgaac
acccccggctcatatatgtgtgtgtgctctcaggggttcacactgagcagcaatggcacc
gcctgcaaggatgtggatgagtgtctgaaaccaggagtgtgttcagatggtcgctgtgtg
aacacagacggttccttccactgtcgatgtgcaaacggcttcgcctccaaccctgagcgg
acggcctgcctcgacgttgatgagtgcatctcttccaatggttcagtctgtgggtcccag
cgctgtgaaaacacgatcggttcgtaccgctgcctcacttcctgtgaggccggctacaga
gttcagcctgacggcagctgtgcggatgaggacgagtgtgcgtcccagccgggcgtgtgc
ggcacggcgcgttgtgagaacctgaagggaggctttgtgtgtagatgtgacatcacaggg
caggtgtttgaggcgacgagcagaagatgtgtcagcgccgcaccacgcctgacagaaacc
gggcggggcacccagatcctgtcctctgcattctcctccgcttttcatgtcagaatggtg
gagctggctccaccattgttagcccccactccccctccagtgtcagccccaacccccctc
cccgaggctcgtcctggggagctgagggagtgttactacaacctggccaacagggggagc
tgcagcctgctggcggccaacaccacccagcaggagtgctgctgcacggtgggggagggc
tgggggcttggctgccagtattacacctgcccacctgcaaacacagctgagtttctggct
ctgtgtctcagcggcagaggatatgtcacagcaggaccaggagtcttcaactacagagat
gtggatgagtgtaaacgcttccagcctcaggtgtgtaagaatggagtgtgtgtcaacaac
atacctggatacagatgctactgctacagcggatacgtttataacagcacgctgttggag
tgtgtcgatcacgatgaatgtgaggaggagacctgtgtgggcggagtttgtgtcaacaca
gtcggttcatattactgcacctgtcctacccatctggttcttgatgagacgcaacgaaac
tgtgtgaactcctcccacagctctatggatgagaacctgtctgtgtgctggcagcatgtg
agcgcagacctgctctgccagagccctctgctggggggccaagtcaccttcaccgactgc
tgctgcatgtacggcgagggctgggggatgggctgcgccctctgcccgtcctcagactca
gaggaatacgccgctctgtgcagttcctttgctcctcccttcccggacagctatcctgaa
ccccctggccctgaaacacgactgcttcttgaatcaggacgaggagctcctccttatggt
tcagacctgtacactcggacgctggtccccagcagagacttcagtcggcctgactacgac
gattactcaccagcagggggcgtcaggtcgggttttggggggaggacccccggcacctcc
agcctgccagaagatgcttatcgtccgtcggattacagttcttactactctgaaggagac
tacagctcccctgacagctccgccccccaaaccccttcattccgactccccccagacccc
cggtccgagataggatttggggcccgtcctttccctccatcccggcctgacggacctcct
ctaagcctggcgccgctgcctggatctccctacgatgatcaggaggaggaggacgagatg
acgtggaggcccagcccaccgtttcctcctttcactgacaggaatcgaggaggaggagga
gcagggggacgaggagcaccaaggaggctgtacgagaggcgttacgagttgtacgctgga
ctgagtgcagcagaggattgtgggatacttcatggctgtgagaacggcaggtgcatccgt
gtcgctgaaggttacacctgtgactgctaccacggatacgagctggacatgacctccatg
acctgcatagacgtcaacgagtgcgaggacggcgttggcctggagttcccgtgcgtgaac
gctcgctgcgtcaacaccgaaggctcgttccgctgcgtctgcaggagggggtacgtcgtg
tcccgcaggcggaaccactgcgtggctgcgtag
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