Oryzias latipes (Japanese medaka): 101170922
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Entry
101170922 CDS
T02443
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101170922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101170922
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101170922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
101170922
NCBI-ProteinID:
XP_011474051
UniProt:
H2L4P1
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Position
6:6366519..6410820
Genome browser
AA seq
552 aa
AA seq
DB search
MSNALLRRNSSKQGLQNLMRLTAQRSIEDAEEVERERRRRAREALHRRSSGSTPGESSPD
SEVLAGENRFDMSFKPTSSLEEDEGFSDWTQRRERRRQQCLQELNLGGQEVQDEKEEVFF
NKLQPTKTTDIHAASASRLPRKEEGEILNNRVETEKRMEDDVEGRMEKKEKNREVLSPSR
QEEIQKPKSETEKRLQMTDPFTSKAFLRQDLKHGIFNGHGPTNEVMSHLKKANRSSSRNV
EPEEAEAIQEVEQRLERIRHSFQEKESQELEQLKLRQAEAEQELEEMKKRREERQKLRKV
EERFKEEEEQQRLAKEEDERKRMKEEIEKRRMEAAERMKTLSTSSIDGEEIFSPISPKVS
TQRITEKTESLNRSLRKSNSFKKMQPLILLPKIDDKLEQYTSAVENSQDARAVKASLTDI
PMSPEVVASKKSLFEAGEAWSQSPSKGASCKDAEGLKVGVASLINQWVRGQSDSSGRPSA
CRAADVKPGDVMQKKNMWEVMGDSGRQEQRLKGSAAEKKFKFVVTGHGKYEKIPAKDQSG
GQSKSDSYHISC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctctgcttaggagaaactccagcaaacagggtctgcagaacctcatgaga
ctgactgctcagaggagcatcgaggacgctgaagaggtggagagagagcgccgtcgaaga
gcccgggaggctttacaccgaagaagcagtggctccacccctggagaatcatcccccgac
agcgaggtgttagcaggagagaacagatttgacatgagcttcaaaccaaccagttccctg
gaggaagatgagggtttcagtgactggactcaacgcagagagagacggaggcagcagtgt
ctgcaggagctcaatttgggaggccaggaagtgcaggatgagaaggaagaagtcttcttc
aacaaacttcagcctacaaaaaccactgacatccatgctgcttctgcaagccgactccca
agaaaagaagagggagagatcctgaataacagagttgagactgagaagaggatggaagat
gatgtggaagggaggatggagaagaaggaaaagaacagagaagtgctgagtccaagcaga
caggaagagattcagaagccaaaatctgagacagagaaaagactgcaaatgacagacccc
ttcacctcaaaggctttccttcgtcaggatttaaaacacggcatcttcaacgggcacggc
cccaccaatgaagtcatgtcacacctcaagaaagcaaacagatcaagcagcaggaacgtg
gagccagaggaggctgaggctatccaggaggtggaacagcgactggagaggatccgccac
agcttccaagaaaaagagagccaagaactggaacaactgaaactgagacaagctgaggct
gaacaggagctggaggagatgaagaagaggagagaggagaggcagaaactccgaaaggta
gaggagcgctttaaagaagaggaggaacagcagcggctagccaaggaagaggacgaaagg
aaacggatgaaggaagagattgagaagaggaggatggaggcagctgaaaggatgaagacc
ctgagcacttccagcattgatggggaagaaatattcagtccaattagccccaaagtttca
actcaaaggatcacagagaagacagaatccctgaaccgatcgctgaggaaaagtaacagc
tttaagaagatgcagcctctcatccttttgcccaagattgatgacaaactggagcagtat
accagtgctgtggagaactctcaggacgcacgggcagtgaaggcatcattgactgatata
cccatgtccccagaagttgttgcctccaagaaaagtctttttgaggctggggaggcctgg
agccagagtcccagcaaaggagcctcctgcaaggatgctgagggtctgaaggtgggcgtg
gccagtctgatcaaccagtgggtgagaggccagtcagacagcagtggcaggccgtcagcc
tgcagagcagcagatgtgaagcctggagatgtgatgcagaagaagaacatgtgggaggtt
atgggagactcagggaggcaggaacaaagactaaagggttcagcagctgaaaaaaagttc
aagtttgttgtgaccggccatggcaaatacgagaagattccagcaaaagaccagagtgga
ggacaatccaagtctgattcctatcatatcagctgctga
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