Oryzias latipes (Japanese medaka): 101171192
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Entry
101171192 CDS
T02443
Symbol
rpp38
Name
(RefSeq) ribonuclease P protein subunit p38
KO
K14523
ribonucleases P/MRP protein subunit RPP38 [EC:
3.1.26.5
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101171192 (rpp38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101171192 (rpp38)
03016 Transfer RNA biogenesis [BR:
ola03016
]
101171192 (rpp38)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101171192 (rpp38)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
101171192 (rpp38)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
101171192 (rpp38)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
101171192 (rpp38)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
101171192 (rpp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
Intu_longin_2
Motif
Other DBs
NCBI-GeneID:
101171192
NCBI-ProteinID:
XP_011483552
UniProt:
H2LZI9
LinkDB
All DBs
Position
16:complement(17912153..17915654)
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AA seq
275 aa
AA seq
DB search
MATSVKPATKKKRIQAKTSFNSPFTSQWSQLPQEDMHFILKTLTDKMISTGLEKKEVKVF
RSWGKRKEEKPPSTAESLSQETQGGELSTNGWTDVAARRQLAIGINEVTKALEKNELHLL
LVCKSARPNHMTNHLIALSATRAVPACQVPRLSQSLSEPLGLKSVLALGFRRCSSIDQEM
FTDTIDAIKPRVPPLDVAWLQEAAPKVPPEVLVGMEEEEEEEEEKMERGQKRKLEVESEI
PEVPSSCTLQPLKVKRIVANPSKKRKTKPEKKSVK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctgtaaagccagccactaagaaaaagcgaatccaagcaaagacctccttc
aactcacccttcacctcacagtggagccaacttccccaagaagatatgcattttatcctg
aaaacgttaacggacaaaatgatttcaacaggtctggagaaaaaagaggtgaaagtgttt
cgatcatgggggaaaaggaaggaagagaaacctccttcaacagctgaatctttgagccag
gagactcaggggggtgagctctccacaaacggctggacggatgttgcagcaagacggcag
ctggccatcggcatcaacgaggtcactaaagctctggagaagaatgagctccacctgctg
ctcgtgtgcaaatctgccagaccaaaccacatgactaatcacctgatcgctttgagtgct
acacgagctgtgccggcctgtcaggtgccacgcctgagccagagtctgtcagagccactg
ggcctgaaaagtgtcctcgcactgggattcaggcgatgctcctctatagaccaagagatg
ttcactgacactattgatgcaatcaaaccaagagttcctccgctggatgttgcatggtta
caagaggcagcgcctaaagtcccacctgaagttcttgttggcatggaagaggaggaggag
gaggaggaggagaagatggaaagaggtcaaaaaagaaaactagaggtggaatctgagatt
ccggaggttccctcttcctgcacactgcagcctcttaaagtgaagagaattgttgcaaac
ccttcaaagaaaagaaaaaccaaacccgagaaaaaatctgtcaaataa
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