Oryzias latipes (Japanese medaka): 101171577
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Entry
101171577 CDS
T02443
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04814
Motor proteins
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101171577
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101171577
04820 Cytoskeleton in muscle cells
101171577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101171577
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
101171577
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
SPARC_Ca_bdg
EF-hand_11
p25-alpha
Motif
Other DBs
NCBI-GeneID:
101171577
NCBI-ProteinID:
XP_004070337
UniProt:
H2L8L8
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Position
7:4415211..4422160
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AA seq
225 aa
AA seq
DB search
MEGYCERPQSRDGFDWSAVLRRPILVQSGSSGEGTYGAGQRSTWTVQDEEDFIHDPSVLL
TSDIMPTDAQSDARSFLTEEMITEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREE
LDAIIEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNSDGFVDREE
FGDILHMTGEAVTEEDIDEMFGEADSNKDGKLDFDEFLKMMENVQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggagggttattgtgagagaccacaatccagagatggatttgattggtcagctgtgctc
cgaagaccaatcctggtccaatccggatcgtctggagagggtacttatggagcggggcag
agaagcacctggactgtgcaggacgaggaagactttattcacgacccgtctgttcttctg
acgtcggacatcatgcccaccgacgcccagagcgacgcccgctccttcctgacggaggaa
atgatcacagagttcaaggccgccttcgacatgtttgacacagatggtggcggtgacatc
agcaccaaggagctgggcaccgtcatgaggatgctgggccagaacccgtccagagaggag
ctggatgccatcattgaggaggtggatgaagatggcagcggcaccatcgacttcgaggag
ttcctggtcatgatggtgcaacagctgaaggaggaccaagctggaaagagcgaagaagaa
ctttctgaatgtttccgcatttttgataagaactcggacggtttcgtggaccgggaggag
ttcggagacatccttcacatgacgggggaagccgtcacagaggaggatatcgatgagatg
tttggtgaagcagactcaaacaaagatggaaaacttgattttgatgagttcctgaagatg
atggagaacgtccagtga
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