Oryzias latipes (Japanese medaka): 101171584
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Entry
101171584 CDS
T02443
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
3.6.4.13
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101171584
Enzymes [BR:
ola01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
101171584
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101171584
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
101171584
NCBI-ProteinID:
XP_011476809
UniProt:
A0A3B3HEX0
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Position
8:19785077..19791784
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AA seq
630 aa
AA seq
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MRGSYGDRDRDRGRDRGSPRFGSSRGGAPGKKFGNPGDRLRRKKWDLDQLPKFEKNFYSE
HAEVERMSQFDVEEFRRKKEITVRGSGCPKPLTSFHQAQFPQYVIDVLMQQNFKEPTAIQ
AQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLDRGDGPICLVLAPTRELAQ
QVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQIN
IGALELSANHNILQIVDVCTESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRRM
RRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDVASRGLDVEDVKFVINYDYPNS
SEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELVRVLEEARQAINPKLLQLVETGRGG
GGGGGRSRFRGSNSNNPNLMYQDECDRRMRSVGGGSSSKEGNGYGRDNRGGGAGRDGDRS
SSSSYRDRSGRDGGRISNSHDQYQNNDLYGGTRAGAATGGVPGVQAPPPLTGPQPLMAQQ
FNPPQPMMGLMGQASFQFVPPPPPSIPNRK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagaggttcttatggagacagagatagagaccgaggtcgtgacagaggtagtcctcgc
tttgggtccagtcgaggcggagcacctggtaaaaagttcggaaacccgggtgatcgtttg
cgcaggaagaaatgggatctggatcagctgcccaaattcgagaagaacttctatagtgaa
catgctgaagtggagcgaatgagccagtttgacgtggaggaatttcgtcggaagaaggaa
ataacagttcgtggatccggatgcccaaagccgctcaccagcttccatcaggcccagttt
ccccaatatgtgatcgacgtgctgatgcagcagaatttcaaagagcccacagccatccag
gcgcagggcttccctctggctctcagtggaagggacatggtgggaatcgctcagactggc
tctgggaagactttagcgtatctcctgcctgccatagttcacatcaatcatcagccttac
ttggatcgaggagatggacccatttgtctggttttagctccaacaagagaactggctcag
caggtccagcaggtggcatgcgattatgggaaatcatcccggatcaaaagcacttgtgta
tatgggggcgctcccaagggacctcagatccgggatctggagagaggtgttgagatctgc
atcgccactccaggtcgtctgattgactttcttgagtcaggaaagaccaacctgcggcgc
tgcacctacctcgttctggatgaagctgaccgcatgttggacatgggctttgagccgcag
attcgcaaaattgtggaccagatcaggccagacagacaaacgctcatgtggagcgccacc
tggcctaaagaggtgcggcagttggcagaagacttccttaaagagtacgttcagattaac
attggagctctggagctgagtgccaatcacaacatcctgcagatcgtggacgtttgtacg
gagagcgaaaaggaccaaaagttgatccagctgatggaagagatcatggccgagaaggag
aacaagaccatcatctttgtagagaccaagaaacgctgtgatgacctcacacgcaggatg
aggcgtgacgggtggccagcaatgtgcattcatggagataagagccagccagagagggac
tgggtgttgtcggagttccgtagcggtaaagctcccgtcctcattgcgactgacgtggct
tcacggggtttagatgtggaggatgtcaagtttgtcatcaattacgactatccaaactca
tccgaggactacatccatcgcatcggccgcaccgcccgcagcactaacaaaggcacggct
tacaccttcttcactccggggaatgtccggcaggcccgggagctcgtccgggtgctggag
gaggcccgccaggccatcaaccccaaactgctgcagctggttgagaccggacggggagga
ggcgggggaggcggccgctcccgtttccgtggctccaactcaaacaatcccaatctgatg
tatcaggacgagtgtgatcggcggatgcgctccgtgggtggaggcagcagcagcaaggag
ggaaacggctacggcagagataaccgtggaggaggagccggccgtgacggagaccgctcc
tcttcctcctcctacagagaccggagcggcagagacgggggccgcatctccaactcccac
gaccagtaccagaacaacgacctgtacggcggcaccagggctggcgcagcgacaggcggg
gttccaggggtgcaggccccgcctcctctaacaggcccccagccgttaatggcccagcag
ttcaacccgcctcagcccatgatgggcctaatgggccaagcctccttccagtttgttcct
cctcctccaccgtcgatcccaaacaggaaatga
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