KEGG   Oryzias latipes (Japanese medaka): 101171584
Entry
101171584         CDS       T02443                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
  KO
K13178  ATP-dependent RNA helicase DDX17 [EC:3.6.4.13]
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    101171584
Enzymes [BR:ola01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101171584
Spliceosome [BR:ola03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101171584
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 101171584
NCBI-ProteinID: XP_011476809
UniProt: A0A3B3HEX0
LinkDB
Position
8:19785077..19791784
AA seq 630 aa
MRGSYGDRDRDRGRDRGSPRFGSSRGGAPGKKFGNPGDRLRRKKWDLDQLPKFEKNFYSE
HAEVERMSQFDVEEFRRKKEITVRGSGCPKPLTSFHQAQFPQYVIDVLMQQNFKEPTAIQ
AQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLDRGDGPICLVLAPTRELAQ
QVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRR
CTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQIN
IGALELSANHNILQIVDVCTESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRRM
RRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDVASRGLDVEDVKFVINYDYPNS
SEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELVRVLEEARQAINPKLLQLVETGRGG
GGGGGRSRFRGSNSNNPNLMYQDECDRRMRSVGGGSSSKEGNGYGRDNRGGGAGRDGDRS
SSSSYRDRSGRDGGRISNSHDQYQNNDLYGGTRAGAATGGVPGVQAPPPLTGPQPLMAQQ
FNPPQPMMGLMGQASFQFVPPPPPSIPNRK
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgagaggttcttatggagacagagatagagaccgaggtcgtgacagaggtagtcctcgc
tttgggtccagtcgaggcggagcacctggtaaaaagttcggaaacccgggtgatcgtttg
cgcaggaagaaatgggatctggatcagctgcccaaattcgagaagaacttctatagtgaa
catgctgaagtggagcgaatgagccagtttgacgtggaggaatttcgtcggaagaaggaa
ataacagttcgtggatccggatgcccaaagccgctcaccagcttccatcaggcccagttt
ccccaatatgtgatcgacgtgctgatgcagcagaatttcaaagagcccacagccatccag
gcgcagggcttccctctggctctcagtggaagggacatggtgggaatcgctcagactggc
tctgggaagactttagcgtatctcctgcctgccatagttcacatcaatcatcagccttac
ttggatcgaggagatggacccatttgtctggttttagctccaacaagagaactggctcag
caggtccagcaggtggcatgcgattatgggaaatcatcccggatcaaaagcacttgtgta
tatgggggcgctcccaagggacctcagatccgggatctggagagaggtgttgagatctgc
atcgccactccaggtcgtctgattgactttcttgagtcaggaaagaccaacctgcggcgc
tgcacctacctcgttctggatgaagctgaccgcatgttggacatgggctttgagccgcag
attcgcaaaattgtggaccagatcaggccagacagacaaacgctcatgtggagcgccacc
tggcctaaagaggtgcggcagttggcagaagacttccttaaagagtacgttcagattaac
attggagctctggagctgagtgccaatcacaacatcctgcagatcgtggacgtttgtacg
gagagcgaaaaggaccaaaagttgatccagctgatggaagagatcatggccgagaaggag
aacaagaccatcatctttgtagagaccaagaaacgctgtgatgacctcacacgcaggatg
aggcgtgacgggtggccagcaatgtgcattcatggagataagagccagccagagagggac
tgggtgttgtcggagttccgtagcggtaaagctcccgtcctcattgcgactgacgtggct
tcacggggtttagatgtggaggatgtcaagtttgtcatcaattacgactatccaaactca
tccgaggactacatccatcgcatcggccgcaccgcccgcagcactaacaaaggcacggct
tacaccttcttcactccggggaatgtccggcaggcccgggagctcgtccgggtgctggag
gaggcccgccaggccatcaaccccaaactgctgcagctggttgagaccggacggggagga
ggcgggggaggcggccgctcccgtttccgtggctccaactcaaacaatcccaatctgatg
tatcaggacgagtgtgatcggcggatgcgctccgtgggtggaggcagcagcagcaaggag
ggaaacggctacggcagagataaccgtggaggaggagccggccgtgacggagaccgctcc
tcttcctcctcctacagagaccggagcggcagagacgggggccgcatctccaactcccac
gaccagtaccagaacaacgacctgtacggcggcaccagggctggcgcagcgacaggcggg
gttccaggggtgcaggccccgcctcctctaacaggcccccagccgttaatggcccagcag
ttcaacccgcctcagcccatgatgggcctaatgggccaagcctccttccagtttgttcct
cctcctccaccgtcgatcccaaacaggaaatga

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