KEGG   Oryzias latipes (Japanese medaka): 101175137Help
Entry
101175137         CDS       T02443                                 

Gene name
hdac4
Definition
(RefSeq) histone deacetylase 4
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    101175137 (hdac4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101175137 (hdac4)
Enzymes [BR:ola01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101175137 (hdac4)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101175137 (hdac4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Motif
Other DBs
NCBI-GeneID: 101175137
NCBI-ProteinID: XP_023804915
LinkDB All DBs
Position
2
AA seq 1083 aa AA seqDB search
MATSYFTFLTCGSEGILGKEPPLEVLKTSALNHIPTVDISSALPLRLPPAAIPMDLRVDH
QASPPGQQSPGPLGGTGGQQGAVAASMREQQLQQELLTLKQKQQIQRQILIAEFQRQHEQ
LSRQHEAQLQEHIKQQQELLALKHQQELLEHQRKMENHRLEQELEKQQREQKLQLLKNKE
RGQESAVASTEVKMRLQEFVLNKKKALAQRSLNQAGVPNDAPYWYRKTQHSSLDQSSPPQ
TGVSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRRDSPIATA
KKRSLDMADSACSSAPGSGPSSPNNSSNSIPNENGVAVAVSNSMEVSLAQRLCGGAEAGS
VNPLSLYTSPSLPNITLGLPATATATAASNVTSAQQDGGLQPALSLSPPFHLTPYLAEPA
GGHGAHSPLLQHMVLMEQSPAQSPLVTGVGGLSMSSASMAKLQRPHRPLGRTQSAPLPQG
SAAQAHAQALALQQLVVQQQHQQFLEKHKQQFQQQLHLNKIMAKPGESPVGRQHQSHPEE
TEEELREHQEGGASPGVIIKQEPLDPQEVQEEALQQQRERDSQTEQELLFRQQALLLEQQ
RIHQLRNYQASLEAAGVSVSFPGHRPLSRAQSSPASASSFPISVPLPDPPIKPRFTTGLV
YDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQTVHSE
AHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVF
KVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAARLLQQRLSVSKVLIVDWDVHH
GNGTQQAFYDDPNVLYVSVHRYDDGNFFPGSGAPDEVGSGPGVGFNVNVAFTGGLDPPMG
DAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLGGYTLTSKCFGYLTKQLMTL
AGGRLVLALEGGHDLTAICDASEACVAALLGQELDPLPKSVLEQRPNANAVRSLEKVIET
HCKYWRSVHRFSPRLGLSLLEAKRADSEEAEAVSAMASLSVANTSTMDQRPEEEEPMEEE
APL
NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt
atggcgacttcctatttcaccttcctcacctgtggatcagagggaattctgggaaaggag
ccgccgctggaggtgctgaagacgtctgcgctcaaccacatcccaacagtggacatcagc
tcggcgctgccgctgcgtctgcctccggccgccatccccatggacctgcgcgtggaccac
caggcgtccccccctggccagcagtcgcccgggccgctgggggggacggggggccagcag
ggcgcggtggcggcctccatgcgcgagcagcagctgcagcaggagctgctgacgctgaag
cagaagcagcagatccagcggcagatcctcatcgccgagttccagcggcagcacgagcag
ctgtcccgccagcacgaggcgcagcttcaggagcacatcaagcagcagcaggagctcctg
gctctgaagcaccagcaggagctgctggagcaccagaggaagatggagaaccaccgtctg
gagcaggagctggagaagcagcagcgggagcagaagctgcagctgctgaagaacaaggag
aggggccaagagagcgccgtggcgagcacggaggtgaagatgcgtctccaagagtttgtc
ctaaacaagaagaaggccctggcccaaaggagcctgaaccaggccggtgtccccaacgac
gccccctactggtaccgaaaaacccagcacagctctctggaccagagctccccgccacag
accggcgtgtccacctacaaccaccccgtgctgggcgtctacaacccccgggacgacttc
ccacttcggaaaacggcctccgagccgaacctgaagctgcgctcccgcctgaagcagaag
gtcagcgagcgccgcagcagtcctctgctccgccgccgcgacagccccatcgccaccgcc
aagaagcgctcactggacatggcagattcggcgtgcagcagcgctccgggctcgggcccc
agctcccccaacaacagctccaacagcatccccaacgagaacggcgtcgccgtggcggtt
tccaacagcatggaggtgtctctagcccagcggctgtgcggcggcgccgaggcgggctcc
gtgaaccccctctccctctacacctcgccgtccctacccaacatcaccctggggctgccc
gccacggccaccgccaccgccgcctccaacgtcacctccgcccagcaggatggaggtctg
cagccggcgctctccctcagcccgccgttccacctgaccccctacctggcagaaccggcc
ggcgggcacggcgcccacagcccgctgctccagcacatggttctgatggagcagagtccg
gctcagagccccctggtgacgggcgttggcggtctgtccatgtcgtcggcgtccatggcc
aagctgcagcggccgcaccggcccctggggaggacccagtcggccccgctgccccagggg
agcgccgcccaggcccacgcccaggcgctggcgctgcagcagctggtggtccagcagcag
caccagcagttcctggagaagcacaagcagcagttccagcagcagctgcacctcaataag
atcatggccaagcccggtgagtcccccgtgggacggcagcatcaaagccaccccgaggag
acggaggaggagctgagggagcaccaagagggaggagcctcaccaggggtcatcatcaag
caggagcctctcgacccccaggaggtgcaggaggaggcgctgcagcagcaaagggagcgg
gacagccagacggagcaggagctgcttttccgacagcaggctctcctgctggagcagcag
aggatccaccagctgaggaactatcaggcctccctggaggctgccggcgtgtccgtctct
ttcccgggtcaccgccccctctccagggcgcagtcctcgccggcgtccgcctcctccttc
cccattagtgtccctttgccagatcctcccatcaagcctcgtttcaccacagggctggtg
tacgactccctgatgcagaagcaccagtgcatgtgcgggaacaccaacagccacccggag
cacgccggacgcatccagagcatctggtcgcggctgcaggagacggggcttcgggcgcag
tgcgagtgcatccgagggaggaaggccacgctggaagaactacagacggtccactctgag
gcccacgttctgctgtacggaaccaacccgctgaggcagaaattggactgttccatcacc
cccatgtttgtgcggcttccgtgtggaggggtgggggtggacagcgacaccatctggaac
gaggtccactcatccagcgccgctcgcctcgccgtgggttctgtggtggagctggttttt
aaagtggcgacaggagagctgaagaacggtttcgccgtggtgcggccccctggacaccac
gcggaggagagcacgcccatgggtttctgctacttcaactcggtggccattgcagcccgg
ctgctgcagcagaggctgagcgtcagcaaggtcctcatcgtggactgggacgtgcaccat
ggcaacggcacccagcaggccttctacgacgaccccaacgtcctgtacgtctctgtgcat
cgctacgacgacggcaacttcttccccgggagcggcgctcctgacgaggtgggcagcggt
cctggagtcgggttcaacgtcaacgtggccttcacaggaggcctggacccccccatggga
gatgcggagtacctggctgccttcaggtcggtggtgatgccgatagccaacgagttcgcc
cccgacatcgtgctggtttcgtccggcttcgacgccgttgagggacaccccccaccgctg
ggcggctacaccctgacctccaaatgcttcgggtatctgaccaagcagctgatgacgctc
gccgggggcaggctggtgctggcgctggaggggggtcacgacctcacagccatctgcgac
gcctctgaggcctgcgtggcggccctgcttggccaggagctggacccgctgccgaagtcc
gtcctggagcagaggcccaacgccaacgccgtccgctctctggagaaggtcatagagacc
cactgtaaatactggcgctccgtgcatcgcttctcgccacggctgggactgtcactcctg
gaggccaagcgagcggattcggaggaggccgaggccgtcagcgccatggcgtccctgtct
gtggccaacaccagcaccatggaccagaggccggaggaggaggagcctatggaggaggag
gcgccgctgtaa

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