Oryzias latipes (Japanese medaka): 101175579
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Entry
101175579 CDS
T02443
Symbol
tpm3
Name
(RefSeq) tropomyosin alpha-3 chain
KO
K09290
tropomyosin 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04260
Cardiac muscle contraction
ola04261
Adrenergic signaling in cardiomyocytes
ola04814
Motor proteins
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101175579 (tpm3)
04820 Cytoskeleton in muscle cells
101175579 (tpm3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101175579 (tpm3)
04261 Adrenergic signaling in cardiomyocytes
101175579 (tpm3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101175579 (tpm3)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101175579 (tpm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
Lebercilin
DUF745
ATG16
DUF3450
XhlA
CENP-F_leu_zip
Crescentin
Nuf2_DHR10-like
HrpB7
DUF16
SlyX
Fez1
Laminin_I
BORCS7
Motif
Other DBs
NCBI-GeneID:
101175579
NCBI-ProteinID:
XP_004074228
UniProt:
A0A3P9HQJ0
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Position
11:21740816..21749285
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AA seq
284 aa
AA seq
DB search
MEAIKKKMLMLKLDKENALDQAEQAEADRKAAEDRSKQHEDELLQMQKKLKSTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatcaagaagaaaatgctcatgctgaagttggacaaggagaacgcactggac
caggcagaacaagctgaggctgacaggaaagcagctgaggacagaagtaaacagcatgaa
gatgaactcctgcaaatgcagaagaagctgaagtcgacggaggatgagctggataaatac
tctgaggccctgaaggacgctcaggagaagctggaagttgctgacaaaaaagcagctgat
gctgaggctgaagtggcttccctgaacaggcgcatccagctcgtggaggaggagttggac
cgagctcaggagagactggcaacagcgttacagaaactggaggaagcagagaaggcagca
gatgagagtgaaagaggcatgaaggtaatcgagaacagggccctaaaagatgaagagaag
atggagctgcaggagattcagctaaaagaagctaaacacatagcagaggaagccgatcgc
aaatatgaagaggtggctcgtaaactagtgattgttgaaggggagctggagcgtacagag
gagagggcagaacttgccgaggctaaatgtgctgaactggaagaagaactgaagaatgtc
accaacaacctcaagtctctggaagctcaggctgagaaatactctcaaaaggaggacaaa
tatgaagaggaaatcaagattttaactgacaaactcaaggaggctgaaaccagagctgag
tttgcagaaagatctgtcgctaagctggagaagactattgatgatttagaagatgagctt
tatgctcagaaactgaagtacaaagccatcagtgaagaactggaccatgctctaaatgac
atgacttctatctaa
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