Ostreococcus lucimarinus: OSTLU_16923
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Entry
OSTLU_16923 CDS
T01029
Name
(RefSeq) predicted protein
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OSTLU_16923
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
olu01001
]
OSTLU_16923
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
olu03021
]
OSTLU_16923
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_16923
Enzymes [BR:
olu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
OSTLU_16923
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
OSTLU_16923
Protein kinases [BR:
olu01001
]
Serine/threonine kinases: Other
TAF1 family
OSTLU_16923
Transcription machinery [BR:
olu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
OSTLU_16923
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
OSTLU_16923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
Motif
Other DBs
NCBI-GeneID:
5003872
NCBI-ProteinID:
XP_001419661
JGI:
16923
UniProt:
A4S369
LinkDB
All DBs
Position
9:647923..652602
Genome browser
AA seq
1559 aa
AA seq
DB search
MARADDDDDYDDDVDDDDRGRGATYADAGARDDDDDDDYDGASEDAMDASDDGDAYEDES
ESESEDDDYDEDVGKTKKRGKTGRTTRASGGAVVVVPTTTGRGERGVKVASVNADDALRA
QLSGKQDPMAFVISSSVPETGEVLKFTSLLHNARDGRTYAAAFGDARRGAGEDDASKATN
RRLDMEQREDDGGGSENDEDYDEDAEDGDEDDAAWFAKVDENFPLERYATLNPTLSDDED
DDEYYADNEAARPALDVGEAEARMKPRRGESGLENEEWERGVVWGADSDEDEEIRLAAVG
IDTVGAFKKPRRGEETDLSSQVTVPSLPPATALASATSRSWGELDGESPSGGASSFDSAV
SDYMRHLSLYGVVDEKQQSGDVDMTDANAARGAGEMLRMRNHDFANGRWLGDVEWEGKPR
QVIDPHRKYILPKVQVNPNDPRLVLQYKGDLEATVWKWANAVMAPSWDLDPVNDIDEALN
ISMDDKYKEENEQTVDTGERPPRQGRIDGIQHAEFLLTSVPQLVRDPLNDYPAPRPMLRP
PTVLPKHATASMKIKIAGSELQTFKVCIKSLNIHSAVINLKVRGTDTIGSVIPRIRKRWT
DLDGPIHLYYPGSPKPNEKLNEEMTLVDAGLQAQVGLPIIYLVAPKVTFISEEAALAPLA
SDAVLAPPGAYKKPSDLSARSGTLMMVQYTEARPPLIAKPGMGAKKVVYYRRKTLGDQGA
RPYANATTTVIDLKPNAPSPFLAELPPGRGITALETSMFRAPLFQQAKSDDYVDFLLIRA
PNGKLTLREAPSLHLAGQQEPHVEIPAPGSDMLKDFEERLVNATVLRYFLNLQAKGLIEP
GTMPTVKSTDVAATLSHALSVRDVRKNIRRKICAVRRGAEANEDEYVLNPSYRFEHEKEV
QRMATPEEVCAYESYRHAVAVLCKDRDRDEQERILRLSSLSLQQLKNAVTILIRHSEGKR
KRQLENLELWLQIQPWAQTHEFLQASLGTKGILHLETSRRIQRLTGKFYNYIRRMTVPDP
PEDRRPRREPGTVTGTNADLRKLTMPQAQRILENFGVEKEVILRLERWKRIGLIRELSGA
ATADGTNSHAGMARFARRLRVSEADQLKEIREHSDLLFKRQMKQYSQRHTRHEDSSSGGE
TDEDDSSSDSESESDSLADELEKQLEEKAAKDAPNEEDERAELEALRNALKDGSSIEPSV
DPMKALAQGILVPGKKLKLKRVSTHIFPDGRSAKVEDDITEYAGEAWLQARAQGVEAADA
ATTAALIACGMDKPPEPPKEALERKELDDEETGLTPEARARYEMLRQRKRAKERVRRAGE
KIKRLQSMGVTDEGADLANAQKSPGITPSERPAPVVPGPGGLKIKLGVSKKTMDKVFSSG
ATPQKKSTLGRKLPWDKVLIKVTESAMKHGTYGQVFTPAVTLSDYAKFVEQPMDLGAIMA
RLREGLYNDPSDWASDVKLIAVNAQAYHGSEEPVELRLDWVPGMAADMVNYIADQAKRHE
ADIKASFSDFSADSLRVARQGATAGGDSAPAEVKTEVPTEPAAPPKPLPKLKFSFGKKS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcggacgacgatgacgattacgatgacgacgtcgatgacgacgatcgagga
cgcggcgcgacgtacgcggacgcgggggcgcgagacgacgacgacgacgacgattacgac
ggcgcgtccgaagacgcgatggacgcgagcgacgacggcgacgcgtacgaagacgagagc
gagagcgagagcgaggacgatgattacgacgaagacgtcgggaagacgaagaagcgcggg
aaaacgggacggacgacgcgggcgagcgggggggcggtggtggtggtgccgacgacgacg
ggacgcggcgagcgaggcgtgaaggtggcgtcggtgaacgcggacgacgccctgagggcg
cagttgagtgggaaacaggatcccatggcgttcgtcatctcgagctcggtgccggaaacg
ggagaggtgttgaagtttacgtcgttgttgcacaacgcgcgagacggacgaacgtacgcg
gcggcgttcggggacgccagacgaggcgcgggagaggacgacgcgtccaaggcgacgaat
cgaagattagacatggaacaacgagaagacgacgggggggggagcgagaacgacgaagat
tacgatgaagacgccgaggacggggacgaagacgacgccgcgtggttcgccaaggttgac
gaaaattttccgctcgagcggtacgcgactttaaatcccacgctgagcgacgacgaggac
gacgatgagtactacgccgataacgaggccgcgcggccggcgttagacgtcggcgaagcc
gaggctcgcatgaaaccgcgtagaggcgagagcgggttggaaaacgaagagtgggagcgc
ggagtggtctggggcgcagattccgacgaagacgaagagattcgtctcgccgcggtcggt
atcgacaccgtgggcgcgttcaaaaagccgcgacgcggcgaagagacggacttgtcatcg
caagtgacggttccgtcgttacccccggccaccgcgctcgcgtcggcgacgtcgagatct
tggggagagctcgacggggagagcccgagcggcggcgcgagctcgttcgatagcgccgtc
tcggattacatgcgacatctcagcttgtacggcgtcgtagacgagaagcagcagagcggt
gatgtggacatgacggacgccaacgccgcgcgtggggcgggtgaaatgctgcgcatgcga
aatcacgacttcgcgaacgggcgttggttgggcgacgtcgagtgggagggtaaaccgcgt
caagtcatcgatccacatcgcaagtacatcttgccaaaggtgcaagtgaacccgaacgat
ccgagattggtgttgcagtacaagggtgatttagaagcgacggtgtggaaatgggccaac
gccgtcatggcgccgagctgggatctcgatcccgtcaacgacatcgacgaggcgttgaat
atcagcatggatgacaagtacaaggaggaaaacgagcaaactgtagacactggcgagcgt
cccccgagacaaggacgaattgacggcattcaacacgccgaattccttctcacgtcggtg
ccccaactcgttcgcgatcccctcaacgattatcccgcgcccaggccaatgctgcgaccg
ccgacggtgctcccgaaacacgccacggcgtcgatgaaaattaaaatcgcggggtcggag
ttgcaaacgtttaaggtttgcatcaaatcgctcaatattcacagtgcggtgataaacttg
aaagttcgcggtaccgacaccatcggaagcgtcatccctcgcattcgcaagcgctggacc
gacttagacggtcctattcacttgtactacccgggaagtccgaagccgaacgaaaagttg
aacgaagaaatgacgctcgtcgatgcgggcttgcaagcgcaagtcggcttgccgatcatc
tatctcgtggctccgaaggttacgttcatcagcgaagaggcggcgttggcgcccctcgct
tccgacgccgttctcgcgcccccgggcgcgtacaaaaaaccctcggatttgtcggcgcga
agtggtacgctgatgatggtgcagtacacagaagcgcgcccgccgctcatcgctaagcct
ggtatgggagcaaagaaggttgtgtactatcgcagaaagacgctcggcgatcaaggcgcg
cgtccatacgccaacgcgacgacgactgtcattgatctcaagccgaacgcgccgtcaccc
ttcctcgccgaacttcctcctgggcgaggcataacggcccttgaaacgagcatgttcaga
gcaccgttgtttcagcaagcaaagtctgatgactacgttgattttcttctcatcagagct
ccgaacggcaagttgacgcttcgcgaagcgccgtcgcttcacctggctggacaacaagag
ccacacgtagagattccggcgccggggagtgacatgctcaaagactttgaagagcgtctc
gtcaacgccaccgtactccgctacttcttgaacctgcaagcgaaagggctcatcgaaccc
ggcacgatgccgacggtgaaatcgaccgacgtcgcggcgacgctctcgcacgcgctttcc
gttcgagatgttcgcaaaaatattcgccgaaagatttgcgcggtgcgccgcggcgccgag
gcaaatgaggatgagtatgttctcaatccttcgtaccgattcgagcacgaaaaagaggtg
caacggatggcgacgccagaagaagtgtgcgcgtacgagtcgtatcgtcacgcggttgct
gtactctgcaaggaccgcgatcgcgacgaacaggagcgaattttacgattgtcgtctctt
tcgcttcaacagttgaagaatgcggtgaccatcttgatccgacacagcgagggcaagcgc
aagcgtcaactggagaacttggagttgtggctgcaaattcagccgtgggcgcaaacgcac
gaattccttcaggcttcgctgggcacgaagggaattttacatctcgagacgtcgaggaga
atccagcgactcactggaaagttctacaactatattcgacgtatgactgtaccagatcct
ccggaagatcgtcgacctcgccgcgagcccggaaccgtgacggggacgaatgccgatctc
cgtaagcttacgatgcctcaggcgcaacgcatccttgaaaactttggggtagagaaggaa
gtgattctcaggcttgaacgatggaagagaatcggtttgattcgtgaattgtctggtgct
gcgaccgcggatggcacgaactctcacgcgggcatggcgcgtttcgcccgtcgcttgcga
gtgagcgaagcggaccaactcaaagagattcgcgaacattctgatttgctcttcaaaaga
cagatgaagcaatattctcagcgacacacgcgtcacgaagattcttcgagcggtggcgag
acggatgaagacgattcgtcgagcgacagtgaaagtgaaagcgattctttggcagatgag
ttggaaaagcaactcgaagaaaaggctgccaaggatgcgccgaacgaagaagacgaacgc
gccgagctcgaggcgcttcgtaacgcccttaaggacggtagttccatcgagccatccgtt
gacccgatgaaggctttggcgcaaggcattttggtgcccggaaagaagctgaaattgaag
cgagtttcgacccacatcttcccagacggtcgatccgccaaggtggaggacgacatcacc
gagtacgcgggagaggcttggcttcaagcgcgcgcgcaaggtgtcgaagccgcagacgct
gcgacgactgctgcactcatcgcatgcggcatggataagccgccagagccgccgaaggaa
gccttggagaggaaggagctcgacgacgaagaaactggtcttactccggaagcaagagcg
cgttacgaaatgcttcgtcagcggaaacgtgccaaggagcgcgtgcgacgagccggcgag
aagatcaagcgtttgcagtccatgggcgtcaccgatgaaggcgcggacttggcgaacgcg
caaaagtcgcccggaatcacgccaagcgagaggcccgcacccgtggttccaggtcccggt
ggactgaaaattaagcttggcgtcagcaagaagacgatggataaagtgttcagctctggc
gcgacgccgcagaagaaatccacgctcggtcgcaagttgccttgggataaagtactcata
aaagtcaccgaaagcgcaatgaaacatggaacatacggccaagtgtttacgccggcggtg
acgttgtcagactacgcaaagtttgttgagcaacccatggatctgggcgccatcatggca
cgccttcgcgagggcttgtacaatgatcccagcgactgggcatcggacgtcaagttgatc
gcagtcaacgcgcaggcgtaccacgggagcgaagaaccggttgagcttcgtctggattgg
gttcctgggatggcggcggacatggtcaactacatagccgatcaagcgaaacgtcacgaa
gcggacatcaaggcttcgttttcggatttctccgccgactctctgcgcgttgcgcgtcag
ggagccacggccggtggtgatagcgctccagccgaagtcaaaaccgaagttccaacagag
cccgcggcgccgccgaagccgcttccaaagctcaagttttcgtttggaaagaaatcgtag
DBGET
integrated database retrieval system
