Ostreococcus lucimarinus: OSTLU_23918
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Entry
OSTLU_23918 CDS
T01029
Name
(RefSeq) predicted protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OSTLU_23918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
olu03019
]
OSTLU_23918
03036 Chromosome and associated proteins [BR:
olu03036
]
OSTLU_23918
Messenger RNA biogenesis [BR:
olu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OSTLU_23918
Chromosome and associated proteins [BR:
olu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OSTLU_23918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nucleoporin2
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
4999523
NCBI-ProteinID:
XP_001415560
JGI:
23918
UniProt:
A4RRF2
LinkDB
All DBs
Position
1:654964..657966
Genome browser
AA seq
1000 aa
AA seq
DB search
MAFGGFGGFGAAQQPPSPFGAAQQPHSGAFGATGARPATTGAFGGGFGGQGAASGGFGSA
IGGAGSGAPGAARAVADACKFWNRGSCKFGARCNNKHCCSKCGSTAHRAVSCSMTPGVSG
YRATRVMDKELLTPGTSYAMVHSISAMPENLGKSAEEIRAAAYASADQPATSAGGFGAPA
ATSPFGGTTGGGSAFGGASGGAFGASATPASPFGAPSGGAFGASTSTPGGFGASAAPSAF
GAPSGGGAFGSSPTGGFGAPAAAPSPFGGAATPSAFGAPASSAPSGGLFGSTTGGFGASP
ASSAFGAPSTTSAFGASAPTPGAFGATPSASPFGAAPSTPGAFGAPASTPAFGASGAFGA
APTPSAFGAPSSTPAFGAAPASSPFGAAPAAASPFGAAPSTPAFGAAPTPGAFGAAPSSG
GGLFGAAPSTGGGLFGASAPSTPGAFGASTPAPGGFGAPKPAGGLFGAAPSTPATGGLFG
ASTGATTPGFAGSTPGFGAAPSTGGLFGASAPATGGGGLFGAAPSAAATPAFGGFGASAA
TPAFGASSAASGGLFGASAPTSAPSGGLFGAAPTSSPGGGLFGASAPATGGAFGGGLFGA
AKPASGGLFGAAPTTGAAPGGGLFGASAPTSAPSGGLFGAAPTAGGGLFGASAPAAGGSI
FGAGGLGASQPAMGALVPFGAQPAVASTPYGSPLQPPQLALATTDQAQAKRSLLGKMQSP
AAGAAATAFPVRSLTPRSPWLTSRGGLSREPKPRGGASLPSPGGAAQAIGTPTSAARPGS
AVSVATPSSGGWLFKPRENPRALFIRPEGVSASPAPSVALAVSPTRADQSPERRQVHFAE
DKENTPGKGAPVSHNIIMPKLTSEGYSMNPTLEQMERMFERSGDDALAAVDNFSVSNEAF
GRVKWLEPVDVRGLDLDKIVSFEQACLCLYPEDQGIEPPEEGEGLKKRAEVTLYGILPKK
SGTAAKEKYREKIVKQTEKAGAELVEYNPDTGIWKFILQL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcggtggattcggtgggttcggcgcggcgcagcagccgccgtcgccgttcggc
gcggcgcagcagccgcacagcggcgcgttcggcgcgacgggggctcgaccggcgacgacg
ggcgcgttcggcggtggattcggggggcagggcgcggcgagcggggggttcgggagcgcg
atcggcggcgctgggagcggcgcgccgggcgcggcgcgggcggtggcggacgcgtgcaag
ttttggaaccgcgggagctgtaaattcggggcgcggtgtaacaataagcactgctgttca
aagtgcggatcgacggcgcatcgcgcggtgagctgctcgatgacgccgggggtgagcgga
tatcgagcgacgcgggtgatggataaggagctgttgacgccggggacgtcgtacgcgatg
gtgcactcgatcagcgcgatgccggagaatttggggaagagcgcggaggagattcgggcg
gcggcgtacgcgagcgcggatcagccggcgacgagcgcgggtgggttcggggcgccggcg
gcgacgagtccgttcggggggacgacggggggaggaagcgcgttcgggggggcgagcggg
ggagcgttcggagcgagcgcgacgccggcgagtccgtttggggcgccgagcgggggtgcc
ttcggagcgtcgacgtcgacgccgggcggtttcggggcgtcagccgcgccgagcgctttc
ggcgcaccgtcgggaggcggagcgttcggatcatcgcccacgggtgggttcggggcgccc
gcggcggcgccgagcccgtttggcggcgccgcgacgccgtccgctttcggagcgcccgcg
agttcggcgccgagcggcggtttgttcgggtccacgacaggcggtttcggcgcttctccg
gcgtcttccgcgttcggggcgccgtcgaccacgagcgcgttcggggcgagcgcgccgacg
ccgggtgctttcggcgccacgccgtcggcgagtccgtttggggcggcgccttcgacgccg
ggcgcgtttggggcgccggcttcgacgcccgctttcggcgcatcgggcgcgtttggcgcc
gcaccgacgccgagtgcgttcggagcgccgtcgtctacgcccgcgttcggtgcagcgccc
gcgtctagccctttcggcgccgcgcccgcggcggcgagtccgttcggcgcggcgccgtcg
acgccggcattcggtgcggcgccgacaccgggcgcgttcggcgcggcgccatcatccggt
ggcggactgttcggcgcggcgccttcgacgggtggtggtttgttcggtgcgtctgcgcct
tccactccaggcgcgttcggcgcgagcacgcccgcgcccggaggatttggcgctccaaag
cccgcgggcgggctgttcggcgctgcgccgtcgacgccagcgactggggggctgtttggt
gctagtacaggtgcaaccactcctggcttcgccggttcaacgccagggttcggcgcagca
ccgtccacgggtggtttgtttggcgcctcggctccggcaaccggaggcggcggtttgttt
ggcgccgcgccgtctgcggcggcgacgcctgcgttcggtggatttggcgcgtctgcggcg
acacccgcgtttggtgcatcttctgcggcgtccggtggtttgttcggtgcatccgcgccg
acttctgcgccaagcggtggactgtttggcgccgcgccgacgtcttcgcccggcggcggt
ttgttcggcgcttcggcaccggcgaccggcggtgccttcggtggcggacttttcggtgcc
gcgaagcccgcgagcggtggacttttcggcgccgccccgacgaccggagctgctcctggt
ggcggactgtttggtgcgtcggctccgacgtcggcgccgagcggcggtttgtttggcgcg
gctccgacggcgggtggtggattgtttggcgcttccgcacccgccgctggaggtagcatt
ttcggcgcaggggggcttggagcctcgcagccggcgatgggtgcgctcgtacctttcggc
gctcagcctgccgttgcgtccactccgtacgggtcaccacttcagcctccgcagctcgcg
ctggcgacgacggaccaagcccaagcgaagagatctttgctcggtaagatgcaaagccca
gccgctggtgccgcggcgacggcattcccagtgcgttcgctgacgccacgctctccttgg
ctcacgagccgcggtgggttaagccgcgaaccgaagccgcgtggcggcgcgtctttgccg
tctcctggaggcgcggcacaagccatcggaacacccacttcggctgctcgccctgggagc
gcggtgtccgtggccacgccatcgagtggtgggtggttgttcaagccacgcgagaatcct
cgcgcgctcttcattcgcccagagggtgtttctgcttcgccagcgccgtcagtcgcgctc
gcggtttcgccgacgcgcgcagatcaaagcccggaacgtcgtcaagtccatttcgcagag
gacaaagaaaacactccgggtaaaggcgcaccggttagtcacaatatcatcatgccgaag
ctcacttctgaaggctacagcatgaacccgacgcttgaacaaatggaaagaatgtttgag
cgcagcggcgacgacgccctcgcggcggtggacaacttttctgtgtcgaacgaagctttc
ggtcgcgtaaagtggctcgagcccgtcgatgttcgtggcttggatctcgataaaatcgtg
tctttcgagcaggcgtgcttgtgcctgtaccccgaagatcaaggtatcgagccgccggaa
gagggtgaaggtttgaagaagcgcgccgaggtaacgctgtacggaatcttgccgaagaag
tctggcaccgccgccaaggaaaagtatcgcgagaagattgtgaaacaaaccgaaaaagcg
ggcgccgaactcgtagaatacaacccagatacagggatttggaaattcatcctgcaactt
tga
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