Ostreococcus lucimarinus: OSTLU_45056
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Entry
OSTLU_45056 CDS
T01029
Symbol
metH
Name
(RefSeq) B12 dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu00270
Cysteine and methionine metabolism
olu00450
Selenocompound metabolism
olu00670
One carbon pool by folate
olu01100
Metabolic pathways
olu01110
Biosynthesis of secondary metabolites
olu01230
Biosynthesis of amino acids
olu04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
OSTLU_45056 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OSTLU_45056 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OSTLU_45056 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
OSTLU_45056 (metH)
Enzymes [BR:
olu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
OSTLU_45056 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
BtpA
Motif
Other DBs
NCBI-GeneID:
5000739
NCBI-ProteinID:
XP_001417046
JGI:
45056
UniProt:
A4RUZ2
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Position
3:complement(755214..758972)
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AA seq
1252 aa
AA seq
DB search
MQKRVMVIDGAMGTAVQKYKLSEDDFRGDRYKNHTHDLKGNNDILVLTKPEVISEIHEAY
LAAGADIIETNTFSSTMIAQADYELDKKEEVRDMNLAAARLAKAACVKFTEQNPAKPRFA
AGAIGPTNRTLSVSPSVENPAFRACTFDEIVDAYYEQIEALVEGGVDLILVETIFDTLNA
KAAIFAIEKFFEAYGTRLPLFISGTIVDNSGRTLSGQTNEAFWNSVSHAKPMAVGLNCAL
GAKDMVPYIENLSKCADCWVFAYPNAGLPNAMGGYDQKGAEMAEDCRVFLEKGLLNGIGG
CCGTTDDHIGALAQMVAPYTPRKKHDVPEIMRISGLEPFNYVPNENDYRKTFINLGERCN
VAGSSIFKKAIVDGNFEKALAIALKQVEHGAHVIDINMDDGLIDGETAMSRFVNLLVSEP
DASKVPFMIDSSKFHVVEAGLKCSQGKCIMNSISLKGGEEEFLHHAKIVKRHGAAVVVMA
FDEEGQAATEAEKVRICCRAYKLLVEQLGFNPQDIIFDPNILTIGTGMEEHNNYGVDFIN
ATREIKRLCPGCKISGGVSNLAFSFRGNEPVRRAFHSAFLYHACKAGMDMGIVNAAQVEE
DVYEKMDKELLEYVEDVLLNRCTNATERMLEFAATLDPKSTPCNLRKKGAAGGGAVKAAG
SGKEWRNQPCEKRLEYALIKGIDEFCIADTEECRVGDKYKSCLEVIEGPLMDGMNVVGDL
FGAGKMFLPQVIKSARVMKKAVGHLIPFMDAEKALTGSTEASTAGTFLIATVKGDVHDIG
KNIVAVVLGCNNFKVIDIGVMCPCEKILDAVRESKADILGLSGLITPSLDEMVTVAKEME
KAGMRIPLLIGGATTSKMHTAVKLTPNYSGGVIHVLDASRAVPVAQTLLDKRKHADFMDD
INETYAEMRDEFYAGLEDRKYLTLQKARATVKPVDFTAAPNVPVTPKFCGAKAMEVSIDD
VLPYIDWNPFFQVWQLRGRYPNRGYPKIFNDETVGPEAKKLFDEANAMITKIKQNKRLTL
KGIYGFYPANSVGDDIVVYTDESRTTTHHTFYTLRQQAEKDTDEPYMALSDFIAPKDSGV
KDYLGMFVCSAGFGLDELTAEFKAANDDYSYIMAEALADRLAEAFAELLHERVRKDDWGY
AKDESFNCEDLLKVKYQGIRPAPGYPSQPDHTEKATMWDLMKVKEEIGVELTETFAMLPS
ASVSGLYFAGACSEYFNVGKLTSDQVEEYAGRKKMELSEVQRWLGPNLSYEP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgcgtgatggtgatcgacggcgcgatgggaacggcggtgcaaaagtacaag
ctgagcgaggatgacttccgtggtgatcgttacaagaatcatacgcatgacttgaagggg
aacaacgacatcttggtgctgacgaagccggaggttatctctgaaatccacgaggcgtat
ctcgccgcgggcgccgacatcatcgagacgaacacgttctcttcgacgatgatcgcgcag
gcggactacgagctcgacaagaaggaagaagtgcgcgacatgaacttggccgctgctcgc
ttggcgaaggcggcgtgcgtgaagtttacggagcaaaatccggccaagccgcgctttgcc
gccggcgccattggtccgacgaacagaacactctcggtgtctccatccgtcgagaacccg
gcgttccgcgcgtgtacgttcgacgagattgttgacgcgtactacgagcagattgaggca
ctcgtcgagggtggtgtggacttgattttggttgaaacgatctttgacacgctcaacgcc
aaggcggcgattttcgccattgagaagttctttgaggcttacggtacgcgtcttccgttg
ttcatctccggcaccatcgtcgacaactccggtcgtaccttgtctggccaaacgaacgag
gcgttctggaactccgtcagccacgccaagccgatggctgttggcttgaactgcgctctc
ggcgccaaggacatggtcccgtacattgagaacttgagcaagtgcgccgactgctgggtg
ttcgcgtaccctaacgccggtttgccgaacgccatgggtggttacgatcaaaagggtgct
gaaatggccgaagactgccgcgtcttcctcgagaaggggttgttgaatggcatcggtggc
tgctgcggcaccacggatgaccacatcggcgctctcgcccagatggtggcaccgtacacg
ccgcgcaagaagcacgatgtgccagaaattatgcgcatctccggtctcgagccgttcaac
tatgtgccgaacgaaaatgactaccgcaagacgttcatcaacctcggtgaacggtgcaac
gttgcgggctcgtccatcttcaagaaggccatcgtcgatggtaactttgagaaggctctc
gccatcgcgctcaagcaagtcgagcacggtgcgcacgtcattgacatcaacatggacgac
ggcttgatcgacggcgaaactgccatgtctcgctttgtgaacttgctcgtttccgagccg
gacgcctccaaggttcctttcatgattgactcttccaagttccacgtcgtcgaggctggc
ttgaagtgcagccaaggcaagtgcatcatgaactctatctccctcaagggtggtgaggaa
gagttcttgcatcacgcgaagatcgtgaagcgtcacggcgccgccgtcgtcgtgatggcg
ttcgacgaggaagggcaagcggcgactgaagctgagaaggtgcgcatttgctgccgcgct
tacaagctcttggtcgaacagcttggcttcaacccgcaagacatcatctttgacccgaac
attcttacgatcggcacgggcatggaagaacacaacaactacggcgttgacttcatcaac
gctactcgcgagatcaagcgtctctgccctggttgcaaaatcagcggaggcgtgtccaac
ttggccttctccttccgcggcaacgagcccgtgcgccgcgcgttccacagcgccttcttg
taccacgcctgcaaggccggtatggacatgggtatcgtgaacgccgcgcaagtcgaagag
gatgtgtacgagaagatggacaaggagttgttggaatacgtcgaagacgtgctcttgaac
agatgcaccaacgccactgagcgcatgctcgaatttgcggcgacgcttgacccgaagtcc
actccttgcaaccttcgcaagaagggtgccgctggcggtggtgccgtgaaggctgctggg
tcgggtaaggaatggcgtaaccagccgtgcgaaaagcgactcgaatatgccctcatcaag
gggattgacgagttctgcatcgctgacacggaagagtgccgcgtgggcgacaagtacaag
tcttgcctggaagtcatcgaaggtccactgatggacggcatgaatgtggttggtgatctc
tttggcgccggtaagatgtttttgccgcaagttattaaatctgcccgtgtgatgaagaag
gctgtcggccaccttatccctttcatggatgcggaaaaggctctcaccggcagcactgaa
gccagtaccgccggtacctttttgatcgccacggtgaagggtgacgtgcacgacatcggt
aagaacattgttgccgtcgttttagggtgcaataacttcaaggttattgacattggcgtg
atgtgtccctgtgaaaagattttagatgcggtgagagagagcaaggctgacattttgggt
ctttcgggcttgatcacaccgtcattggatgagatggtgaccgtcgcaaaggagatggaa
aaggcaggtatgagaatcccgcttctcatcggcggtgcgacgacgtctaagatgcacact
gcggtgaagctgacgccaaactactccggcggtgtgattcacgttctcgatgcctcgcgt
gcggtgccagtggctcagaccttgttggacaagaggaagcacgctgacttcatggacgac
atcaatgaaacgtacgctgagatgcgtgacgaattttacgctggtttagaggatcgtaaa
taccttaccctccaaaaggcgagagcaactgtgaaaccggtggacttcaccgccgcgccg
aatgtccctgtcactcccaagttctgcggagccaaggcgatggaggtgtcgatcgacgat
gtgcttccgtacattgactggaatccgttcttccaggtgtggcagctgcgtggtcgctac
ccgaaccgtggctacccgaagattttcaacgatgaaactgtcggccccgaggcgaagaag
ctcttcgacgaggccaacgcgatgatcacaaaaatcaagcaaaacaagagacttactctc
aagggtatttatggtttctacccggccaactccgttggcgatgacatcgtcgtttacaca
gatgaaagccggacaacgacgcaccacactttctacacgctccgccagcaagccgaaaaa
gacaccgacgagccgtacatggcgctcagtgacttcatcgccccgaaggatagcggtgtg
aaggattacctcggtatgttcgtgtgctctgctggatttggtctcgatgagcttacggcc
gagttcaaggctgcgaacgacgattactcctacatcatggcggaagccttggctgatcgc
ctcgctgaagcgttcgcggagttgctccacgagcgcgtccgtaaggatgactggggttac
gccaaggatgagtctttcaactgcgaagacttactcaaggtgaaatatcaaggcattcgt
ccagcgccgggttatccgtcccagccagatcacacggaaaaggcgacaatgtgggacttg
atgaaggtcaaggaagaaattggcgtcgaacttaccgagacgttcgccatgcttccctcg
gcctcggtctctggcttgtacttcgcaggcgcgtgctctgaatatttcaacgtcggtaag
cttacgtctgaccaagttgaagaatacgcgggccgcaaaaagatggagctctctgaagtg
caacgctggttgggaccgaacttgagttatgaaccttag
DBGET
integrated database retrieval system
