Ostreococcus lucimarinus: OSTLU_49314
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Entry
OSTLU_49314 CDS
T01029
Name
(RefSeq) predicted protein
KO
K08736
DNA mismatch repair protein MSH3
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OSTLU_49314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_49314
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OSTLU_49314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
5001502
NCBI-ProteinID:
XP_001417225
JGI:
49314
UniProt:
A4RVX7
LinkDB
All DBs
Position
4:372404..375154
Genome browser
AA seq
916 aa
AA seq
DB search
MTPLEQSVKTFKAKYPGTMLMIEVGYKYHFYGDDARDASKVLGIFAYQSRNYLTASVPVV
RLNVYVRRLVKAGYRVGVVKQTETAALKASGETGNKSGLFERKLVGLYTKATLDAGAALS
DAGDDGEKSSMASGVLSNHLLCVAEDRVAGGASTSASTRVGLAAIETSTGDVLSGEFMDT
MQRPGLESRLLCISPAEIVLVEPISEPTARLIKAMYGSGANAARVERVTRDELTGVTLTG
TKAEEATPLVHTALCAGAKYLREFGQADILHLDAAFRPLEGADEMKLSPNVLRQLEVLTS
SAGTYKGSLLWLMNHTVTPMGGRLLRHWVSHPLRSKSAIEGRLDAVDALRELTSFEEGSM
MDHDKVSHNTFNGLKIQLKQLPDLERSLARVFHGTATPGEFVGALTSLAKFSESCAAMRA
SVSGEIKSTLLEAQIEAVTDPLLHALADQFLNALNLEIACVDKPSKTKIGLFKDDAESFP
DLHAATAAVEEAKRAMDDLLPELRRKLGMPRLGYTTVGGVGGGEWLIEVPMDRSCPTTWI
KVSSNKSKKVVRYHPPEVTEAAAALECANERHMFAADAAWKEFLSSFRDNYAAFRSATSA
VATLDALHALAILSRNEGYVRPELLDDSAPPSLHVVDGRHPVLDAHLLDDFVPNSIDLHG
DRTRALVITGPNMGGKSCYIRQVALLSVMAQVGSFVPAKQARLTVLDAIYTRMGASDNLA
MGSSTFLEEMSEASNILEMCTPRSLVIMDELGRGTSTHDGVAIAAATLEHLVRDAKCFTL
FVTHYPSVARDVQAKYPTHCASCFTSYVELEGSSEEMPRIQFLYKLTPGVAHRSFGLNVA
RMACLPPAVIQSAGVKASELEITTARRALARRAFNRETADACASATSSVLAAIASGDHAT
MIAARAAATAVPDARV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttggaacagagcgtgaagacgttcaaggcgaaatatccggggacgatgctg
atgatcgaagtcgggtacaagtatcacttttacggcgatgacgcgcgggatgcgagcaag
gttttgggaatattcgcgtatcagtcgaggaactatctcacggcgagcgtgcccgtggtg
cggttgaacgtgtacgtgcgacggttggtcaaggcggggtatcgagtgggggtggtgaaa
cagacggagacggcggcgttgaaggcgagcggggagacggggaataaatcggggctgttt
gaacggaaattggttggattgtacacgaaagcgacgttagacgcgggagcggcgttgtcg
gacgcgggcgacgacggggaaaagtcgagcatggcgtcgggggtgttgtcgaatcatttg
ttgtgcgtcgccgaggatcgcgtcgcgggcggggcgtcgacgtcggcgtcgacgcgcgtg
ggattggcggcgattgaaacaagcaccggggacgtactgagtggagagttcatggacacc
atgcaacgacctgggttggagtcgcggttgttgtgcatttcacccgcggagatcgttctc
gtggaaccaattagcgaaccgacggcgcgtttaatcaaggcgatgtacggttcaggcgcg
aacgcggcgcgcgtggagcgcgtgacgcgagacgaactcactggcgtcacgcttaccggt
accaaggcggaggaggcgacacccttggtgcacaccgcactctgcgcgggcgccaagtat
ctgagagaattcggacaagctgatattcttcatctcgacgccgcgtttcgcccgctcgag
ggcgcggacgaaatgaaactctcgccgaatgttttgcgtcaactcgaggttttgacgtct
tccgcgggaacgtacaagggaagcttactttggttgatgaatcacaccgtcacacccatg
ggtggtcgcttgctgcgtcactgggtgagtcatccactgcgttcaaagtccgccatcgaa
ggccgactggacgccgtcgacgcgctgcgcgagttgacgtcgtttgaggaaggatcgatg
atggaccacgacaaagtgagtcacaacacgttcaacggattgaagattcaactaaaacag
ctcccagatctcgaacgaagtctcgcgcgcgtgtttcacggcacggcaacgcccggtgag
ttcgtcggggctttgacgtcgctcgcaaaattcagcgagtcgtgcgcagcgatgcgcgcg
agcgtctctggggagatcaagtcgacgttgctggaagcgcaaatcgaagccgtcaccgat
cctcttcttcacgcgttagcagaccagtttttgaacgcgctgaatctggagattgcgtgc
gtggacaagccttcgaagacgaagattggactcttcaaggacgacgcggaaagctttccg
gatttgcacgccgccactgcggcggtggaggaggcgaagcgcgcgatggacgatttactc
ccggaactgcgccgtaagctcggcatgccgcgtcttggttacaccaccgtaggcggtgtt
ggcggcggcgagtggctcatcgaagtccccatggatcgctcgtgtccgacgacgtggatc
aaggtgagttcgaacaagagcaaaaaggttgtacgctaccacccgccggaagtcacggaa
gcggcggcggcgttagaatgcgcgaatgaacgacacatgtttgccgccgatgcggcatgg
aaagaatttctgtcgtcgtttcgagacaactacgccgcttttcgatcggcgacgtcggct
gtggcgacgttggacgcgttgcacgcgttggcgattctgtcaagaaacgaaggatacgtc
cgaccagaattgctcgacgattccgcgccaccatctctgcacgttgtcgatggtaggcat
ccagtgctcgacgcgcaccttttggatgactttgtgccaaacagtatcgacctccacggc
gaccgtacgcgcgctctcgtgatcaccggaccaaacatgggtgggaagagttgctacatt
cgtcaagtggcgttgttgagcgtgatggcgcaggtcgggagttttgttccagcaaaacag
gcccgcctcacagtgctcgatgcaatctacacgcgcatgggagcgagcgacaatctcgcc
atgggttcatcgactttcctcgaggaaatgtccgaggcgtcaaacattttagaaatgtgc
acgccgagatcgctcgtcatcatggacgaactcggtcgagggacgtcgacgcacgacggc
gtcgccatcgcggccgccacgctcgaacacctcgttcgagatgcaaagtgtttcacgcta
ttcgtgacgcactacccatcggtcgcgcgcgacgtgcaagccaagtacccgacgcactgc
gcgtcgtgcttcacgtcgtacgtcgaacttgaaggttcgtcggaggaaatgccgcgaatt
caattcctgtacaagctcaccccgggcgtcgcccatcgctcgttcggtttaaacgtggct
cgcatggcgtgcttaccgcccgcggtgattcaatccgccggcgtcaaggcttccgaatta
gaaatcaccaccgctcgtcgagcgctcgctcgtcgagcgttcaaccgcgaaaccgccgac
gcgtgcgcctcggcgacgtcctccgtcctcgccgccatcgcctcgggcgatcacgccacc
atgatcgccgcgcgtgcggccgccaccgccgtccccgacgctcgcgtctga
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