Oscillatoria nigro-viridis: Osc7112_2033
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Entry
Osc7112_2033 CDS
T02375
Name
(GenBank) putative exonuclease, RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oni
Oscillatoria nigro-viridis
Pathway
oni03410
Base excision repair
oni03430
Mismatch repair
oni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Osc7112_2033
03430 Mismatch repair
Osc7112_2033
03440 Homologous recombination
Osc7112_2033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oni03400
]
Osc7112_2033
DNA repair and recombination proteins [BR:
oni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Osc7112_2033
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Osc7112_2033
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Osc7112_2033
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
AFZ06504
UniProt:
K9VG61
LinkDB
All DBs
Position
complement(2376786..2379341)
Genome browser
AA seq
851 aa
AA seq
DB search
MTELLQNLPNQPLSQPPAWLIQAVRNHAPELPGNYAAALLWYRGIQNPEQIPGFLNPKLY
QPASPFEFGLEMNWAIERIQQARNSGEKVAIWGDFDADGITSTSVLWDGLGEFFTQNDQL
IYYIPNRLTESHGLNIPGIDALAKSGISLIITCDTGSTNIAEIEYATSLNIDTIVTDHHT
LPDDRPPATAIINPRYFPPNHQLFNLSGVGVAYKLVEALYHTLPNIPQRPIADLLELVAI
GLIADLVQLTGDSRYLAQIGIQQLQKQIANPTRPGVAKLLELCKRSGDRPTDISFGLGPR
INAVSRIQGDASFCVELLTSRDKKRCDELANLTEIANTRRKSLQKDVAKDAAHKLAKLDL
STTSVIVLSDPQWPVGVLGLVAGQIAQEYGRPVILFSTEGSEEINENSPETEFTSFFDSQ
SPTLSLSKIARGSARSANQIDLYQLVKDQAHLLHRFGGHPFAAGLSLPVENIPLFTDAVN
QQLRQQYSTDSLTATPVQADLKITVSELGKDLFQELKLLEPCGMGNPAPKLLIENCWFDN
LWNQKIKDLKGQKVEYIKTEFTIRDESSDTGFPGIWWGHNQNEVPQGRCDVTVELDFNTY
KSRYEVRLVAVRERTEENQINSQTKIDWIVDWRNTNNDEELLAASTNLESPRPIDNLVYN
SEKVDRENSIVLKECPASWDELRIWFRQAQHTQKKLAIAYTLPPLVPPQQICQQLIGIAK
YLSRTNKPVTRQQLRQKLGISDTSLQLGFKTLTYLGFKINYRDRAFHITRQPETAQQEDA
PDRIPQPLLDSKSLQFSVPNSPIAARLAGQFLAAVSEEQFRRKYFCEVPLSTIQSIARET
VFQEDSTENPF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgacagaactacttcaaaatttgccaaatcaacccctatctcagcccccagcttggcta
attcaagctgtcaggaaccacgcacccgaactccccggaaactatgccgccgcacttctg
tggtatagaggaattcaaaaccccgaacaaatacccggtttcttaaatcccaaactttac
caaccagcaagtccctttgaattcggactagaaatgaattgggcaatagaaagaattcag
caagcaagaaatagcggagaaaaagtcgcaatttggggagacttcgacgccgacggcatt
acctcaacttccgtactttgggatggactgggagaattttttactcaaaacgaccaacta
atttattacattcccaaccgcttaaccgaatctcacggactcaatatcccgggaatagat
gccttagccaaatctggaattagcttaattattacctgcgataccggcagtacaaacatc
gccgaaatcgaatatgcaactagcttaaacatcgatacaattgtcaccgaccatcataca
ttaccggacgatcgccccccagctacagctattatcaatccccgctactttcccccaaac
caccaactatttaacctttcaggagtgggagtagcttacaaattagttgaagcattatat
cacacattacccaatattccgcagcgcccgatcgcagatttattagaattagtagcgatc
ggcttaattgccgatttagtccaacttacaggagacagccgctacctagcacaaatcggc
atccaacaactgcaaaaacaaatcgcaaatcccacccgcccgggagttgcaaaattgctc
gaactgtgcaaaagatcgggcgatcgcccaaccgacatttccttcggcctcggcccccga
atcaacgccgtcagccgcattcaaggcgacgccagcttctgcgtagaactcctcaccagc
cgcgacaaaaaacgctgcgatgaactagcaaatttaaccgaaattgccaacactaggcgc
aaatctttacaaaaagatgttgctaaagatgccgcccacaaattagccaaactcgacctc
tcaactactagcgtcatcgtcctcagcgacccccaatggcccgtaggagtattaggatta
gtagcgggacaaatcgcccaagaatacggccgccccgtgattttattcagcacagaagga
agcgaagaaattaacgaaaattccccggaaacggaatttacctctttcttcgattcacaa
tcaccaacactttccctatctaaaattgccaggggttccgcccgttccgccaatcaaatc
gacctttaccaattagtcaaagaccaagcgcatttattgcacagatttggcggtcatccc
ttcgctgccggattgagtctccccgttgaaaatatccccctatttaccgatgcagtaaat
cagcaactgcggcaacaatacagtacagatagtttaacagccacccccgttcaagccgac
ctaaaaattactgtctccgaattaggcaaagacttatttcaagaactaaaattgctcgaa
ccgtgcggcatgggcaaccccgcaccaaaattgctgattgaaaactgctggtttgacaat
ctctggaatcaaaaaatcaaggatttgaaagggcaaaaagtagaatatatcaaaacagaa
tttacaattagggacgaatctagcgatacgggatttcccggcatttggtggggacacaat
caaaatgaagttccccaaggccgctgcgatgtcaccgttgaactcgattttaatacttac
aaatcgcggtatgaagtgcgcctcgtagcagtgcgggaacgcacggaagaaaaccaaatc
aattcccagactaaaatagattggatcgtagactggcgcaatacaaataacgatgaagag
ttgttagcagccagcacaaacttagaatctccaagaccgatcgacaatctagtttacaat
tccgaaaaggtcgatcgcgaaaactcgatcgtcctcaaagaatgccccgcaagctgggac
gaactgcggatctggtttcggcaagcacagcacactcagaaaaaactggcgatcgcctac
acattacccccactcgtacccccacagcaaatctgccaacagctaatcggcatcgccaaa
tacctcagccgcaccaacaaacccgtcaccagacagcaactccgccaaaaactcggcatc
agcgacacatccctgcaactggggtttaaaaccctaacatatctcggttttaaaatcaat
tatcgcgatcgagctttccacatcacgagacaacccgaaaccgcacagcaggaagacgcg
cccgatcgaatcccccaacccttattagatagcaaatcccttcaattctcagtgccaaat
tcccccatcgccgcccgtttggcagggcaattcctagcagcagtctccgaagaacaattc
cggcggaaatatttctgtgaagtacctctgtcaaccattcaatcgatcgcccgagagacc
gttttccaagaagattctacagaaaatcccttctaa
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