KEGG   Oreochromis niloticus (Nile tilapia): 100534578
Entry
100534578         CDS       T06104                                 
Symbol
tnfb
Name
(RefSeq) tumor necrosis factor b (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04010  MAPK signaling pathway
onl04060  Cytokine-cytokine receptor interaction
onl04150  mTOR signaling pathway
onl04210  Apoptosis
onl04217  Necroptosis
onl04350  TGF-beta signaling pathway
onl04620  Toll-like receptor signaling pathway
onl04621  NOD-like receptor signaling pathway
onl04622  RIG-I-like receptor signaling pathway
onl04625  C-type lectin receptor signaling pathway
onl04920  Adipocytokine signaling pathway
onl05132  Salmonella infection
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100534578 (tnfb)
   04350 TGF-beta signaling pathway
    100534578 (tnfb)
   04150 mTOR signaling pathway
    100534578 (tnfb)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100534578 (tnfb)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100534578 (tnfb)
   04217 Necroptosis
    100534578 (tnfb)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100534578 (tnfb)
   04621 NOD-like receptor signaling pathway
    100534578 (tnfb)
   04622 RIG-I-like receptor signaling pathway
    100534578 (tnfb)
   04625 C-type lectin receptor signaling pathway
    100534578 (tnfb)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100534578 (tnfb)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100534578 (tnfb)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100534578 (tnfb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:onl04052]
    100534578 (tnfb)
   00536 Glycosaminoglycan binding proteins [BR:onl00536]
    100534578 (tnfb)
Cytokines and neuropeptides [BR:onl04052]
 Cytokines
  Tumor necrosis fators
   100534578 (tnfb)
Glycosaminoglycan binding proteins [BR:onl00536]
 Heparan sulfate / Heparin
  Cytokines
   100534578 (tnfb)
SSDB
Motif
Pfam: TNF DUF4381 MFS_1
Other DBs
NCBI-GeneID: 100534578
NCBI-ProteinID: NP_001266462
Ensembl: ENSONIG00000002250
UniProt: Q5VJN5
LinkDB
Position
LG11:36230048..36231805
AA seq 247 aa
MVAYTTTPVDVEAGPEAKTVVLVEKKSPAEWIWKVCAVLVVVALCLAGVLLFAWYWNTRP
ERMTQLGQPEALKAKNTGDKTEPHSTLKRISSKAKAAIHLEGSDSKGHLEWRNGQGQAFA
QGGFKLEANKIIIPHTGLYFVYSQASFRVICGNTDENEDEEKSLTILSHRIWRYSESMGS
SSTLMSALRSACQDTIQDSFSDHGWYNAIYLGAVFQLNEGDTLWTETNQLSELETDEGRT
FFGVFAL
NT seq 744 nt   +upstreamnt  +downstreamnt
atggttgcatacacaaccacaccagttgacgtcgaggctggtcctgaggcgaagactgta
gttttagttgagaagaaatcacctgcagagtggatatggaaagtgtgcgccgtcctcgtc
gtcgtggctctttgtttagcaggtgtcctgctgtttgcctggtactggaatacaaggcca
gaaaggatgacacaattaggacagccagaagcactaaaggcgaagaacactggcgacaaa
acagagccccactccacgctaaaacggatcagcagcaaagccaaggcagccatccatcta
gaaggcagcgactcaaaaggtcatctggagtggaggaatggtcaaggccaggcgtttgct
cagggcggcttcaagctggaggccaataaaatcatcatcccacacactggcctgtacttc
gtctacagccaggcgtccttcagggtgatctgcgggaatactgacgaaaatgaagatgag
gaaaaaagcctcacaattctcagccacaggatctggcgctactcagagtctatgggaagc
agctccactctgatgagcgccctgaggtcggcgtgccaagacaccattcaggatagcttc
tcagaccacggctggtacaacgccatttacctgggcgctgtgtttcagctgaacgaagga
gacacgctgtggacggaaaccaaccagctatcagagctggagactgacgaaggaaggacc
ttctttggcgtgtttgcactttga

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