Oreochromis niloticus (Nile tilapia): 100691129
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Entry
100691129 CDS
T06104
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04115
p53 signaling pathway
onl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100691129 (cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100691129 (cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100691129 (cop1)
Enzymes [BR:
onl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100691129 (cop1)
Ubiquitin system [BR:
onl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100691129 (cop1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
100691129 (cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf-RING_10
zf-RING_4
UvrD-helicase
Sina_RING
zf_C2H2_10
Motif
Other DBs
NCBI-GeneID:
100691129
NCBI-ProteinID:
XP_003453204
Ensembl:
ENSONIG00000016668
UniProt:
A0A669F690
LinkDB
All DBs
Position
LG18:4021277..4035595
Genome browser
AA seq
717 aa
AA seq
DB search
MMSSNRPQQSAAGASSVPSTSSSSSSSSSTGGTGNTNGGGGSSAPTSNGSTSGNVVPSRT
LAAAGEGGLSVPTLAAVPSPRGGLASLSRPSASSGNRKRSLHQAPLYNGLLNSYEDKSND
FVCPICFEMIDEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIIDNVDQVYPNFLVNELI
LKQKQRSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLLQKKKQLEAESQ
AAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPVMEAECTVPNVE
APSPAPSCSSIIDQPDYNQPPGFGGAAQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSS
KMSRITDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCD
YFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGT
VILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEA
KANVCCVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIV
SASTDSQLKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKT
LLTFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaagcaaccggccacagcaaagcgctgctggggcgagttcagtgcccagcaca
agtagcagcagcagcagcagtagtagtacaggaggcactgggaatacaaacggtggcggt
ggcagcagcgctcccacaagtaatgggagcacttctggaaatgttgtgccctcacggacc
ctggcagcggccggagagggcggcctgtcagtgccaactctggccgccgtgccgtcaccc
cggggcggcttagcttctctcagcagaccgtctgcgtcctctggtaacagaaagagatcc
ctgcatcaggcaccactgtacaacggcctcttgaattcatacgaagataaaagcaacgac
ttcgtctgtcccatttgcttcgaaatgatagacgaggcacacatgacgaagtgcgggcac
agtttttgtttcaagtgtatccgccagagtctggaggacagcaacagatgtcccaagtgt
aactatattatcgataatgtggatcaggtctacccaaactttcttgtaaatgaactgatc
cttaaacaaaaacagaggtcagaagagaagaggctaaagttagatcatccaaatgggtct
cggtggcaggtcttccaggatgttttgagtcctgatcaggagaacttggacctggcaaat
gtcaacctgatgctcgagctgctgcttcagaagaagaagcagctggaagcggaatcccag
gcagctcagagacagatcctcatggagttccttaaagaagccaggagaaacaagagagag
caactagagcaactgcagaaagagctcaacttcctcgaagaagacatcaaacgtgttgag
gaaatgagtgggctgtactctcctgtgatggaggctgagtgtactgtgcctaatgttgaa
gctccctctccagcacccagttgcagtagtattattgaccaacccgactacaaccagcct
ccaggatttggtggagcagcccagggaaaacggcagacctggtacaacagcaccctggcg
tcaagaagaaagaggctcacagctcattttgaggatttggagcagtgctacttctccagc
aaaatgtcccgcatcacagatgagggcaggaacctgaatcagctggatgattttatggag
tgtttgtcaaagttcactcgctataactctgtgcggccgctggccaccctgtcatacgcc
agtgacctctataatggctccagtattgtgtctagtattgagtttgaccgagactgtgac
tactttgccatcgctggcgtaaccaaaaagatcaaggtgtttgagtacggcactgtgatc
caggatgcagtggacatccactaccctgtcaacgaaatgacctgcaattccaaaatcagc
tgtatcagctggagcagttatcacaaaaacctcctggccagcagtgactatgagggaact
gttattttgtgggatggattcacaggccagaggtccaaagtctaccaggaacatgaaaaa
aggtgttggagtgtagacttcaatcttatggacccaaagcttttagcctcaggttctgat
gatgctaaagtgaagttgtggtcaactaatcttgacaattcagtggctagcattgaggct
aaggctaacgtctgctgtgttaaattcagcccaacctccagatatcatctggccttcggt
tgtgcagaccactgtgttcactactatgatctccgcaacactaagcagccaatcatggtg
ttcaaaggccacaggaaggcagtctcctatgccaagttcgtcaacggagaggaaattgtt
tcggcttcgacggacagtcagctgaagctgtggaatgtcaacaaacctcactgcctgcgc
tccttcaagggtcacatcaacgagaagaactttgtgggcctggcctccaacggagactac
gttgcctgtggcagtgagaacaactccctgtatctgtactacaaaggactttccaagaca
ctgttaacattcaagtttgacacagtgaagagcgttctggacaaggataagaaggaggac
gacaccaacgagtttgtcagtgctgtctgctggagggccctgcctgatggagagtcaaat
gtattaatcgctgccaacagtcaaggaacaatcaaggtactcgagctcgtctga
DBGET
integrated database retrieval system