Oreochromis niloticus (Nile tilapia): 100697873
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Entry
100697873 CDS
T06104
Name
(RefSeq) thyroid hormone receptor alpha isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100697873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
onl03000
]
100697873
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
onl03310
]
100697873
Transcription factors [BR:
onl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100697873
Nuclear receptors [BR:
onl03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
100697873
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100697873
NCBI-ProteinID:
XP_005468631
Ensembl:
ENSONIG00000006456
UniProt:
A0A669CQZ4
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Position
LG4:5521556..5637468
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AA seq
416 aa
AA seq
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MEPMSNKQDSNSSEGDEKGWPDVPKRKRKNSQCSVKSMSALSVSVPGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGCCIIDKITRNQCQLCRFKK
CISVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEMMRMLQTRPEPDTAEWELIRMVTEA
HRHTNAQGSSWKQKRKFLPDDIGQGPMVPTSDGDKVDLEAFSEFTKIMTPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPDSETLTLNGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALMQAVLLMSSDRSGLTSMEKIEQCQEAYLLAFEHYIN
YRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagccaatgtccaacaagcaggatagcaactcatctgagggagatgagaaagggtgg
ccagatgtgccgaaaagaaagagaaagaacagccagtgctcagtgaagagcatgtccgct
cttagcgtctctgttccagggtacatccccagctacctggagaaggacgagccgtgtgta
gtgtgtggggacaaggcgactgggtaccactaccgctgcatcacgtgtgagggctgcaag
ggttttttccgccggaccatccagaagaacctccatccgtcctactcctgtaaatatgaa
ggttgctgcatcatcgacaagatcacgcgcaaccagtgccagctgtgccgctttaagaaa
tgcatctctgtgggcatggccatggacttggtgttggatgactcaaagcgcgtggccaag
cgccgtctgatcgaggagaaccgcgagaagaggaagaaagaggaaatgatgcggatgcta
cagacgaggccagagccagacaccgcagagtgggagctgatcaggatggtgaccgaagcc
caccggcacaccaacgcccagggctccagctggaaacagaagcgcaaattcctgcccgat
gatattggccagggtcctatggtgcccacttcagacggagataaggtggatctggaagcc
ttcagtgagttcaccaagataatgacccctgccatcactcgcgtcgtcgactttgccaaa
aaactgcccatgttttcagagctgccttgtgaggaccagatcatcttgctgaaaggctgc
tgcatggagatcatgtcgctgcgtgctgctgtgcgctacgatcccgacagcgagactctt
actctaaacggcgagatggccgtgaaacgcgagcagctgaagaacggcgggctgggcgtg
gtgtcggacgccatctttgatctgggcaagagtctagcacaatttaatctggacgactcg
gaggtggcactgatgcaggcggtgctgctcatgagctcagaccgttcagggctgaccagc
atggagaagattgagcagtgccaagaggcttaccttctggcgttcgagcactatataaac
taccgcaagcacaacattccccacttttggcccaagctgctgatgaaggtgacagacctg
cgcatgatcggggcttgccacgccagccgtttccttcacatgaaggttgagtgtcccaat
gaactgtttcccccgctcttcctggaggtgttcgaggaccaggaagtgtaa
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