Oreochromis niloticus (Nile tilapia): 100702223
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Entry
100702223 CDS
T06104
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03320
PPAR signaling pathway
onl04120
Ubiquitin mediated proteolysis
onl04137
Mitophagy - animal
onl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100702223 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100702223 (ubb)
04137 Mitophagy - animal
100702223 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100702223 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
onl04121
]
100702223 (ubb)
Ubiquitin system [BR:
onl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
100702223 (ubb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
100702223
NCBI-ProteinID:
XP_019209914
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Position
LG10:6290800..6321814
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AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIXPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKXQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIXPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctcactggcaagaccatcaccctggaggttgagccaagc
gacaccattgagaatgtcaaggccaaaatccaggacaaggaaggcattccccctgaccaa
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccaccttgtcctgcgtctcaggggtggcatgcagatcttt
gtgaagaccctcactggcaagaccatcaccctggaggttgagccaagcgacaccattgag
aacgtcaaggccaaaatccaggataaggagggcattccccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccaccttgtcctgcgtctcaggggtggcatgcagatcttcgtgaagaccctc
actggcaagaccatcaccctggaggttgagccaagcgacaccattgagaacgtcaaggcc
aaaatccaggataaggagggcattccccctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaggagtccaccctccac
cttgtcctgcgtctcaggggtggcatgcagatcttcgtgaagaccctcactggcaagacc
atcaccctggaggttgagccaagcgacaccattgagaatgtcaaggccaaaatccaggat
aaggagggcattncccctgaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctctgactacaacatccagaaggagtccaccctccaccttgtcctgcgt
ctcaggggtggcatgcagatctttgtgaagaccctcactggcaagaccatcaccctggag
gttgagccaagcgacaccattgagaacgtcaaggccaaantccaggataaggagggcatt
ccccctgaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaggagtccaccctccaccttgtcctgcgtctcaggggtggc
atgcagatctttgtgaagaccctcactggcaagaccatcaccctggaggttgagccaagt
gacaccattgagaacgtcaaggccaaaatccaggataaggagggcattccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccaccttgtcctgcgtctcaggggtggcatgcagatcttc
gtgaagaccctcactggcaagaccatcaccctggaggttgagccaagtgacaccattgag
aatgtcaaggccaaaatccaggataaggaaggcattncccctgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaggag
tccaccctccaccttgtcctgcgtctcaggggtggcatgcagatcttcgtgaagaccctc
actggcaagaccatcaccctggaggttgagccaagtgacaccattgagaatgtcaaggcc
aaaatccaggataaggaaggcattccccctgaccagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaggagtccaccctccac
cttgtcctgcgtctcaggggtggccaataa
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integrated database retrieval system
