KEGG   Oreochromis niloticus (Nile tilapia): 100709378
Entry
100709378         CDS       T06104                                 
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
  KO
K06752  MHC class II antigen
Organism
onl  Oreochromis niloticus (Nile tilapia)
Pathway
onl04145  Phagosome
onl04514  Cell adhesion molecules
onl04672  Intestinal immune network for IgA production
onl05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:onl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100709378
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100709378
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100709378
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100709378
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:onl04147]
    100709378
Exosome [BR:onl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100709378
  Exosomal proteins of epithelial cells
   100709378
  Exosomal proteins of breast milk
   100709378
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 C2-set_2 Ig_2 I-set
Other DBs
NCBI-GeneID: 100709378
NCBI-ProteinID: XP_019212321
Ensembl: ENSONIG00000009132
LinkDB
Position
LG3:80236575..80241033
AA seq 234 aa
MKVWVLLLILSLVPCVSADDAHGSNFIIGCSDADGENVLILDDEAVWYADFNKQTGVNAL
PAFVDPISFPGFYEEAVADQQICKQNLMVTRKAMKDFPKELDPPSSLIIYTVLNVELGVQ
NTLICHVTGFYPAPVNVTWTKNEQKVTEGTNTSVPFPNKDGSFKQTSRLQFIPKQGDVYS
CTVEHVALIQPMTKFYAVVNSDLILGPAMFCGVGLTVGVLGVAAGIFLLIRATE
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaaggtgtgggtgctgctcctcatcctttccttggtcccctgtgtctctgctgatgat
gctcatgggagcaacttcatcatcggctgttcagatgctgatggagagaacgttctgatc
ctggatgatgaggcagtctggtacgccgacttcaacaaacagacaggagtcaatgctctg
cctgcctttgtagatccaataagctttccaggtttctatgaagaagctgtggctgatcaa
cagatatgcaaacaaaacctgatggtgactcgtaaggctatgaaggactttcccaaagaa
ctcgatcctccttcgagcctgatcatctacactgtactaaatgtggaactcggagtccaa
aacactctgatctgtcatgtgactggtttctatcctgctcccgtcaatgtcacctggacc
aaaaacgagcagaaagtgacagaaggaacgaacaccagcgttcccttccccaacaaagat
ggttccttcaaacagacgtccagacttcagttcatcccaaagcagggagacgtctacagc
tgcactgtggaacatgtggccctgatacaaccaatgaccaaattctatgctgtggtgaac
tctgatctcattcttggacctgccatgttttgtggagtgggtctgactgtcggtgtcctc
ggtgtggcagcaggaatcttcttactcatcagagcaaccgagtga

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