Oreochromis niloticus (Nile tilapia): 100709811
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Entry
100709811 CDS
T06104
Symbol
cacna1a
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04010
MAPK signaling pathway
onl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100709811 (cacna1a)
04020 Calcium signaling pathway
100709811 (cacna1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100709811 (cacna1a)
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100709811 (cacna1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
100709811
NCBI-ProteinID:
XP_019215855
Ensembl:
ENSONIG00000000351
LinkDB
All DBs
Position
LG6:7083685..7241866
Genome browser
AA seq
2420 aa
AA seq
DB search
MARFGDELPNRYGGGGGGGGGGGGGGAGGRGPGRGGSRQGGXPGAQRMYKQSMAQRARTM
ALYNPIPVRQSCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEWMILTTIIANCIVLALEQ
HLPDGDKTPLSERLEETEPYFIAIFCFESGIKILALGFALHKGSYLRNGWNVMDFVVVLT
GILSSVGSTFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFVAILM
FAIIGLEFYMGQFHKTCYDDVTNETADDRPCGTASPSRLCPNGTHCGEEWIGPNYGITQF
DNILFAVLTVFQCITMEGWTNMLYHSNDVSGSYFNWMYYVPLIIIGSFFMLNLVLGVLSG
EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEEDATGNFDGSRRRPT
IKTKNNKTELLNPEEGEDNIGDAVGFARSSIKSGKEGSNYSKKERRLRFFIRKIVKTQAF
YWIVLFLVGLNTICVAVVHYDQPEMLTDFLFYAEFVFLGLFMSEMLIKMYGLGIQPYFHS
SFNCFDCVVIVGSIFEVVWATIKPGTSFGISVLRALRLLRIFKVTKYWAPLRNLVVSLLN
SMKSIVSLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFAAAIMTVFQILTGED
WNEVMYYGIESQGGVKDKGMIFSIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
EQEEAANQKTALQKAKEVAEVSPLSAANLSIAAKEQQKNHTKGNKSVWEQRTSEIRRQNL
MTSREALYNELEQDDWKVGVEGEEASYPRKGRGDMKTHLDRPLVVNPQDNRNNNTNKTQP
GELPLDQEYRRQDIDHCRRAAHCYHYNRDHHQKPFGPDSRETSQLAETRMEHGFSCTSLG
NVEVSVESRPGEERHSHRSHRGHRHRNREGREARSVSPHHSEAGEGNNEHRRARQHRRAA
REGEEGRRHRSRGTEGEGGKVVEGEGRRARRHRQCNHDKSKGHCRREHHSTGPSLSTTRP
IQQYNEDLDNFRNNSKLANAHEHPYALPPDHPDHPDHVNNLLNCRDADTHTLLHSMDSLI
LTSMVKPDYTAIEMPPVYPYPSTNAILQVNKNANTDQKKSEEKKEEESEGGDEDGPKPMP
PYSSCFILSTTNPFRKCCHYILTLKYFEFTILTVIAMSSIALAAEDPVNPKSPQNDVLRN
FDYVFTAVFTFEMLIKMVVLGLFLHEGSYFRDLWNILDFIVVSGALVAFAFTGNNKSKDI
STIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLF
KGRFFHCTDESKEFERDCRGEYLVYEKDEVKAEKREWKKYDFHYDNVAWALLTLFTVSTG
EGWPQVLKHSVDSTYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGD
KMMEDYSLEKNERACIDFAINARPLTRHMPKNKLSFQYRMWQFVVSPPFEYSIMALIALN
TIVLMMKFEGASMVYNNVLKNLNIVFTTFFFLESVLKIIAFGPLNYFRDAWNIFDFVSVL
GSITDILVTEFGNPNNAFSLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCL
LIAMLFFIYAIIGMQLFGNLKLTEDDGINEHNNFRTFFMALMLLFRSATGEAWQEIMLAC
LDKKECDPESGNDKKECGSTFAYTYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEYVRIWAEYDPAACGRISYTDMYQMLRHMCPPLGLGKRCPARVAYKRLLRMDLPV
ADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKTLDLLVTP
HKATDLTVGKIYAAMMIMEYYRQSKTKKLQALREEQNRTPLMFQRMEPPSEGGGTDGQGG
QGQNGLSSTQPDNINSIAPEGGMTESQSWVTAKAQEMFQKTGNWSPDRPYPDDLHDNRHN
PQTVEMREMGRDGYSDTEPYHPMDGHGRTLSMPRLSADNQRRRHRPRGNNLSTITDTSPM
RRSTSSLVHGRTGRGVRLDDYSLERVVSEEGRHGGRRHRDRSHRTSQRSLTRYTDADTGL
GTDLSTTTQSGDLPPKERERDRGRTKDRRHHHHHHHHHGSMDKERYSHDRHDYSHRHPHD
RHWSRSPSEGPDGRGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPAVPRPHVTYSPA
VRKPSYGPPGPGHLRSPSPRHFSPPDHDRGYHHRPPSRHASPHHGGSSSRHGSPRSPRHQ
SPRSPLHGSPRSPHRSRWSGPPPGDSLEGDGPFYERDYEYERHHEPPAYEQSLSHGNPHP
HGGNPHPHPRSPRTARHGPPPPPHPHPRRVPNGYRSSSPSPHRRGPPGVPPHPHHRPAHA
RGPRKGLHEPYSETDEDDWC
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttttggagacgagctacccaacaggtatggaggaggaggaggaggtggtggt
ggcggtggtggcgggggtgccggcggaaggggccccggccgtggcggcagcaggcaaggg
ggcncccccggagcgcagcggatgtacaagcagtcgatggcccagagagcccggaccatg
gccctgtacaaccccatacccgtccggcagagctgcctaacggtcaaccgctccctcttc
ctcttcagcgaagacaacgtggtgaggaagtacgccaaaaagatcaccgaatggcctcca
tttgaatggatgattctcaccaccatcattgcaaactgcatcgtcctggctctggaacag
caccttcccgatggagacaagacgcctctctccgaacgactggaggagacagagccctac
ttcatagccatcttctgtttcgagtctggaataaagatcctggctctcggttttgcatta
cataagggctcctacctgaggaacggctggaacgtcatggactttgtagttgtcctcacc
ggtattttgtcgtcagtggggtctacgtttgacctgagaacactgcgagccgtcagggtg
ctgcgacccttaaaactggtgtctggaattccaagcctgcaggtggtgctcaagtccatt
atgaaggcaatgattcccctgctgcagattggtctcctcttatttgtggccatcctcatg
tttgccatcatcggcctggagttttacatgggacagttccacaagacttgctatgatgat
gttacaaatgagactgcagatgacaggccgtgtggtactgcatcgccatcccggctgtgc
cctaatggcacgcactgtggggaagagtggattggacccaactacgggatcacccagttc
gacaacattctgttcgcagtgctcaccgtcttccagtgcatcaccatggagggatggaca
aacatgctgtaccacagtaacgatgtaagtggcagttactttaactggatgtactacgtc
cccctcatcatcatcggctccttcttcatgctcaacctggtgctgggtgtactctcaggt
gaatttgccaaagagagggagcgagtggagaacaggagcgagttcctcaagctgaggaga
cagcagcagattgagagggagctcaacggataccttgagtggatctgtaaagcagaggag
gtgattctggctgaggaagatgctacagggaactttgatggttcgaggcgtaggccaacc
atcaaaaccaaaaacaacaagacagagctgctgaaccctgaggaaggagaggacaacatt
ggagatgcagtaggttttgcacgctccagcataaagagcggtaaggagggctccaattac
agcaagaaagagcgacggctgcgattcttcatccgtaagatagtgaagacgcaggctttc
tactggatagtgctctttctcgtgggcctcaacaccatctgtgtggccgtggtgcactac
gaccagcctgagatgctcactgactttctcttctatgcagagtttgtcttcctcggtttg
ttcatgtctgagatgctgatcaagatgtacggtctgggcatccagccctacttccactcc
tcattcaactgcttcgactgtgtggtaatagtcggcagtatcttcgaggttgtgtgggcc
accataaaaccaggcacatccttcgggatcagcgtgttacgagctctgcgattgctccgc
atctttaaagtcacaaagtactgggcaccccttcgaaacctggtggtttctctgctgaac
tccatgaagtccatcgtcagcttgctgttcctcctcttcctcttcatcgtggtctttgcc
ttgttggggatgcagctgtttggaggacaatttaactttgacgatggaacgcctcctact
aactttgacacttttgctgcagcaatcatgacagtgtttcagatcctgacaggagaggac
tggaatgaggtgatgtactatggcattgagtcccagggtggagtgaaagacaaggggatg
atcttctccatcttctttattgtcctgacactctttggcaactacactctgcttaacgtc
ttcttggccatcgctgttgacaatctggccaatgcccaggagcttacaaaggatgaagaa
gaacaggaagaggcagccaatcagaagacagcactacagaaggcaaaggaggtggcagag
gtcagccctctgtcagctgccaacctgtctattgctgctaaggagcagcaaaagaaccac
accaagggcaataagtcagtgtgggagcagagaacaagtgagattcgccgacagaaccta
atgacgagccgtgaggcactgtacaatgagctggagcaggatgactggaaggtgggagtg
gagggagaggaggcgtcttacccacggaaaggacgtggtgacatgaaaacccacttggac
aggccattggtggtgaacccacaggacaaccggaataataacaccaacaagacccaacct
ggagaactgccacttgaccaggagtaccggcgccaggacatagatcactgccgccgtgcc
gcccactgctatcactacaaccgtgatcaccatcagaaaccctttgggccagacagcaga
gagacaagccagctagcagagacccgtatggagcacggcttcagctgcacatctctgggt
aacgtggaggtgagcgtagagagccgtccaggggaggagaggcacagccaccggagccat
cggggccatcggcaccggaacagggaaggccgtgaagctcgcagcgtttccccccaccac
agtgaggcaggagaaggaaataatgagcacagaagggccaggcagcaccgcagggcagca
agagaaggagaggaaggcaggcgacaccgatccagggggacagaaggagaggggggaaaa
gttgtggaaggagaagggcgaagagcaagacgacatcgacaatgcaaccatgataagagc
aaagggcattgcagaagggaacaccacagtactgggccaagcctctctaccacccgacct
atacagcagtataatgaggacctggacaacttccgcaacaacagcaagctggccaatgcc
cacgagcacccttacgccctaccaccagatcaccctgaccatcctgaccacgtcaataac
ctgctcaactgccgcgatgctgatacccacacgctgcttcacagcatggacagcttgatt
ctcactagcatggttaaacctgactacacagccatagaaatgccccccgtctacccttac
ccctcgaccaacgccatcttacaagtgaacaagaatgccaacaccgaccagaagaagagt
gaggagaagaaagaagaggagagcgagggcggagatgaagatggccctaaacccatgcct
ccttatagctcttgcttcatattgtccaccaccaacccgtttcggaagtgctgtcactac
atcctgactctgaagtattttgagttcaccatccttactgtcatcgctatgagcagcatc
gctcttgctgcagaggaccctgtcaaccctaagtcaccgcaaaacgatgtgctgcgtaat
tttgactacgttttcacagccgtcttcacatttgaaatgttgatcaagatggtggtgctg
ggcttgtttctccacgagggatcctacttccgtgacttgtggaacattctggactttata
gtggttagtggtgctctggtggccttcgccttcacggggaataacaaaagtaaagacatc
agtacaatcaaatcccttcgtgtgctgagggtgctgcgacctcttaagaccatcaaacgt
ctgcccaagttaaaggctgtcttcgactgcgtggtcaactctctgaagaatgtgttgaac
atcctgattgtctacatgctctttatgttcatctttgctgtggtggccgttcagctcttc
aaaggtcgcttcttccattgcacagatgaatccaaggagtttgagcgcgactgcaggggc
gagtacttggtatatgagaaagatgaagttaaagctgaaaagcgggagtggaagaagtac
gatttccactacgacaacgtggcttgggccttgctcaccctcttcaccgtctcaactgga
gagggttggccacaggtgttgaagcactcagtggactccacctatgagaatcagggcccg
agcccaggttacaggatggaaatgtccatcttttacgtggtgtacttcgttgtcttcccc
ttcttctttgtaaacatctttgtggctctcatcatcatcaccttccaggaacagggcgat
aagatgatggaggactacagcttagaaaaaaatgagcgagcctgtatagattttgccatc
aatgccaggcctctgactcgccacatgccaaagaacaaactgagcttccagtatcgtatg
tggcagtttgtggtatctccgcccttcgagtacagcatcatggctctaatcgcgctcaac
accatcgtcctcatgatgaagttcgaaggtgcatcaatggtctacaataatgtcctgaag
aacctcaacattgtgtttaccaccttttttttcttggaatcagtgctcaagatcatagca
ttcggccctctgaattacttcagagatgcctggaacatttttgattttgtgtctgtcctt
ggaagcatcactgacatattagtgacagaatttgggaatccgaataatgccttcagtttg
agcttcctgaggctcttcagagcagctcgccttataaagctgctgagacagggagagacc
attcgcatcttgctctggaccttcgtccagtccttcaaggctttgccatacgtgtgcctg
cttattgccatgctgttcttcatctatgccatcattggcatgcagttgtttgggaactta
aaactaacagaggatgatggaatcaatgagcacaataacttcagaaccttcttcatggcc
ctaatgctgctgttcaggagtgctacaggtgaagcgtggcaagagatcatgttggcttgc
ctggataagaaggagtgtgatcctgaatcagggaatgataaaaaagaatgtggcagcacc
ttcgcttacacatactttgtctcctttatcttcttgtgctcttttctgatgctgaatctg
tttgtggctgtcatcatggacaattttgagtacctgactagagactcttccatcctgggg
cctcatcacctggatgagtatgtaaggatatgggccgagtacgaccctgccgcctgcggc
cggatcagttacacagacatgtatcagatgctaagacacatgtgtccgccgctaggcctc
gggaagaggtgtcccgcccgggtcgcctataagaggctgctgcgcatggatctaccggtt
gctgatgacaacacggtgcattttaactccacgctcatggctctgataaggacagcactg
gacataaagattgctaagggtggtgcagataagcaccagatggatgcggagcttagaaag
gagatgatggctatctggcccaacctatcgcagaagacactggacttgctggttacccct
cacaaggccacagacttgacggtgggcaaaatctacgctgccatgatgatcatggagtac
taccggcagagcaagacgaaaaagctgcaggccctgcgagaggaacagaaccgaacgcca
ttaatgtttcagcgcatggagccgccctctgagggaggcggcacggacggccagggaggc
cagggccagaacggcctctccagcacgcagccagacaacatcaatagcatagctcctgag
ggtggcatgactgaaagccagtcatgggtgacagccaaagcccaggaaatgttccaaaag
acgggtaactggagcccggacagaccctaccccgacgacctccacgacaaccgtcacaac
ccccagacggtagagatgagggagatggggcgggacgggtactccgacactgagccctat
cacccaatggatgggcatgggcggaccctctccatgccccgcctctcggcagacaaccaa
cggaggagacacaggcctcgcggaaataacctcagtaccattactgacacaagtccgatg
cgtcgctccacgtccagcctagttcacgggcgcacaggccggggcgtgaggctggacgac
tactcgctggagagggtggtgtctgaggaggggagacatggaggacgcaggcacagggac
agaagccaccgcacctcacagcgctccctgaccagatacaccgacgcagatacgggcctg
ggcacagacctcagcaccactacacagtcaggtgatctgccacctaaggagcgcgagcgg
gaccgtggccggaccaaggaccgtcgtcaccaccatcaccatcaccatcatcacggatct
atggacaaggagcggtacagccacgaccgccacgactactcccacaggcatccccacgac
cgtcactggtcccggtcgcccagcgaggggcctgacgggcgaggtcacagacagggcagt
agttcggtgagcggcagcccggttccctctacctcggggaccagcactccaaggagaggc
cgccgccagttgcctcagacccctgcagtcccacgcccacatgtcacctactcccccgca
gtccgcaagcccagctatggccccccagggccaggccacctgcgttcaccctctccacga
cacttctcccctccagaccatgacagaggctaccaccaccgacccccgtcacgccacgcc
tctccccaccacgggggctcttcatcccggcatggttcgccacgctcccctaggcaccag
tccccacgctcgcccctccacggctcacccaggtcgcctcaccgaagccgctggagcggg
cctccacccggggacagcctggagggtgacgggcccttctacgagagagattatgagtat
gagcgtcaccacgagcctcccgcctacgagcagagcctctcccacggcaaccctcatcca
catggaggaaatcctcacccacacccacgttcacctaggactgcccgccacgggcctcct
ccaccccctcacccgcatccacgtagggtaccaaatggttaccgctcatcctcaccttcc
ccacaccgacggggaccaccaggggtgccgccccacccacaccaccggcctgcccatgcc
agagggccccgcaagggcctgcatgaaccttacagtgagacggatgaggatgactggtgc
tag
DBGET
integrated database retrieval system
