Oreochromis niloticus (Nile tilapia): 100711813
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Entry
100711813 CDS
T06104
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03040
Spliceosome
onl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100711813 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100711813 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
onl03041
]
100711813 (snw1)
Spliceosome [BR:
onl03041
]
Complex B
Other components
Prp19-related factors
100711813 (snw1)
Complex C
100711813 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
100711813
NCBI-ProteinID:
XP_003440728
Ensembl:
ENSONIG00000001098
UniProt:
I3IXQ0
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All DBs
Position
LG15:2833374..2842047
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AA seq
536 aa
AA seq
DB search
MSLTSFLPAPTQLSQDQLEAEEKLRAQKSYSTALVASRREPPPYGHRKGWIPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNEDAPGLQKPDEEAIQELTEKTRAALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKGGEDSEARERDEIRHD
RRKERQHDRNISRAAPDKRSKLQRDQDRDVSELIALGKPNPRSSGEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRSGRDMASNIYRPSKNIDKDAYADDLDSLMHNNRFAPDKEF
SGADHGQRREGPVQFEEDPFGLDKFLEQAKQHGGSKRPSTSNRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacgagctttttaccggcgccgacccagctgtcccaagatcagttggaggca
gaggagaagctccgggcccagaagtcctactctaccgccctggttgcatcccgtagagag
ccccctccttatggacacagaaagggctggatacctcgctcactcgaggacttcggagat
ggaggtgctttcccagagatccatgtggctcagtttcctctggagatgggtagaaagaag
aagacatcaaatgccctggcagtacaagtggatgcagaaggaaagatcaaatatgatgcc
attgccagacaaggacagggaaaggataaggtgatcttcagtaaatacacagacctgctt
ccaaaggaagttctcaatgaagatgctccaggactacagaagccagatgaggaggctata
caagagctcacagagaagacccgtgcagccctggagaagcaggtgtctcaaaaaatcgct
gctgccatgcctgtaagagccgcagacaaacaagctcctgcacagtacatcaggtacacc
ccgtcccaacagggagtggcatttaattcaggggccaaacagagggtgatccgcatggtg
gaaatgcagaaagaccccatggaacctccacgttttaaaatcaacaagaagattcctcgt
ggaccaccttctccccctgcccctgtgatgcattctccaagcagaaagatgacagtcaag
gagcagcaagagtggaagattccaccgtgcatctccaactggaagaacgctaagggctac
accatcccactcgacaaacgtctggccgctgacggtaggggtctccaaacggttcacatc
aatgaaaactttgccaagctggccgaggccctctatattgctgatagaaaggccagagag
gccgtggagatgcgagctcaggtagagaagaagatggctcagaaggagaaggaaaagaag
gaggagaagctgagggagctggcccaaatggctcgagatcgcagggcagggatcaaaagt
cacggtgacaaaggtggcgaggacagtgaggccagggagcgtgacgagatccgccatgac
agaaggaaagagaggcagcacgacaggaacatttccagagctgctcccgataagaggtcg
aagctgcagagagatcaggacagggacgtcagtgagctcatcgctctgggcaagcccaac
cctcgttcctccggcgaggcgcagtacgaccagagactcttcaatcagagcaagggtatg
gacagtggttttgctggtggtgaagatgagacgtacaacgtgtatgaccagcctttccgc
agtggcagagatatggcctccaacatctacagacccagcaagaatatagacaaagatgct
tatgcagatgacttggactcactcatgcacaacaacaggtttgccccagacaaagagttc
tcaggcgccgaccacgggcagaggcgcgaaggacctgttcagtttgaggaggatcccttc
ggtctggataaattcttggagcaagccaagcagcacggcggctctaagaggccatccact
agcaaccgctccaaggatgactaccacgacaagaagcgcaggaaggagtga
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