Oreochromis niloticus (Nile tilapia): 102078105
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Entry
102078105 CDS
T06104
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
onl03021
]
102078105
Transcription machinery [BR:
onl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
102078105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
102078105
NCBI-ProteinID:
XP_005463070
Ensembl:
ENSONIG00000017544
LinkDB
All DBs
Position
LG10:1513206..1580054
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AA seq
2161 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADILSVWRRCQQQGRRELWLFWWGDDPNFADLIHNELAAEDDGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPVYHLTEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKENVSEDKVEDMDWEDESLASVEVLVGGVRMVYPACLVLVPQSDIPVVTPVGSS
HCTAVYSGGHQVPASQREPAMSLVTLTPPTSPEEAQTVDSHSAQKWVKMPSSSDAFSVDR
TSHHGGKIPRRLASQMVERVWQECNINRAQNKRKFPAATNGTCEEEPSEKLGTWDFVESS
QRSYCSCSRYKLVKQRTANNTGQAQSAGQPSQPPTKHKTGGEKPEKGDKQQKRPQTPFHH
RCLASDEASIDTEATAGQRLALRSQDGARFPSIRSADVSAIQKGPQLHSGGVSTGPSEQA
NSPQPPPLSPHPCERSEESGEGMKNPSTPNSQHFYQPQPEACLVGVKGSSEEQGGPEALN
QHFQSHQPNPHPGTSAYSEPPEPTVYVGAAINLEDDGSHAPWRLFNLPRRKEAELPTPLL
PGDKLREEAAASQDNLVSVTEVMSTSKWPLKVSEERVQMYRARRNQHLAAAVTDGDHEPE
VDPYAFEEGDVKFTFSNKKDKSGGEREPGKKHKGEDGGTGPSDDPQRAAPHNRVASTSLI
HETDLVVSINDLDNLFNSDEDELAPGSRRPVNGTDGIFGNKEPKSSILDPVPCSDHLIQM
FPTPPSLEQHIMGYSPMNMCSKEYCTMEPGTGMTTVEGPSTLGGHFKIEVEESFCSPKPS
EIKDYSFVYKPELCQPFVGCSMFAPLKTLPSQCLPPIKVPEDCIYRPSWTMGRDMLNPVP
VMTYLNKDSNIPSVGSTMDQEYTPQTQTPFMINSAPPSNSGGTGILPSPATPRFRPYPRT
PRTPRTPRGPSSVQGSIKYENSDLCSPAASTPSTCRPLNSVEPATVPSIPEAHSLYVTLI
LSETVMNLFKDCNFDSCCICECNMNIKGADAGVYLSDPVSEAQKQCGCGFSAVVNRRYGN
GSGLFLEDELDIIGRGTDISREAEKRFEELRLSSLERNGVGRSDHISDELILLMQDQCTN
PFSPISVLEHDAVTRGPGGAPIPPCVRVEERDYRSDCYMAMEHGRQFMDNMSGGKVDEAL
VKSTCLHNWAKQNAVDVSALCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGVQGPLTWQQF
HKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDIGYLV
VCPDNEALLSGAKTFFRDLTAVYESCRLGQHRPISKGYADGIVLVGGSGAKTPVDQPVSD
WFLKAASSNSDTFAKLKLYAQVCRHNLAPYLASQALDSSLLTQPSPTPSSNQSSSTQLSN
STSSTASQQGSVNAAGSTVPSNSGPGNSSASSNNLVTSSGQTGSTIPAKPGSFPPFGSIG
SQGQGGGPQSGQLGQQAGTQNTGVSGDNSSSQAQGPTEPPESTLEREKVGVPTDGESHAV
TYPPAIVVYIVDPFSYEEADRGAGPVPAQSSVWTLGLLRCYLEMLQSLPPHIRNSVSVQI
IPCQYLLQPVRGEDRHIYSQHLKSLAFSVFAQCRRPLPTSTNVKSLTGFGPGLAIDTALK
SPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTD
LYGELLETCIINIDVPHRARRKKGSVRRLGLQKLWDWCLGLVQMTSLPWRVVIGRLGRIG
HGELKDWSILLNRRNLQSLSRRLKDMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDS
VSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAIVQVASSNYTNIDTNIDILNPT
TDGSDAIGILALLDQENDLVDPDIINISPTTSPVHSPGSHYHHGGDGSKGQSTDRMESHE
EVPNLLQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELL
HSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMNM
L
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacagggatcaaatggaagaggtttgtgtggcagggtcccacctct
gcaccaatcctcttcccggtgacggaggaggaccccatcctatgcagcttcagtcgctgc
ctgaaggctgatatactaagcgtgtggaggagatgccagcagcagggtcggagggagctt
tggctcttctggtggggtgacgacccaaactttgctgatctcatccacaatgagcttgca
gccgaggacgatgggctttgggagaatggcctttcctacgagtgtcgcactctgctattc
aaagccatccacaacttgttggagcgctgcctcatgaatcgcagctttgttcgcatcggc
aagtggtttgtcaaaccctatgagaaagatgagaagcccatcaacaagagtgagcacttg
tcctgcgccttcaccttcttcctacatggcgagagcaatgtgtgcaccagcgtggagatc
aaccagcaccagcctgtctaccatctcacagaggagcaccttactctggctcagcaggca
tccagtcccttccaagtgatcctgagtccatttggtctaaatggaacactgactggccag
tcctttaagatgtcagacccacctacccagaagctgattgaggagtggaaccagttctat
cccatcagtcccagtgccaaggagaatgtgtcagaggacaaagtagaggacatggactgg
gaggatgaatctctggcctctgttgaggtcctcgttggtggtgtgcgtatggtgtaccca
gcctgcctggtgctggtaccccagtcagacatccctgttgtgacccctgtggggtcctcc
cactgcactgccgtctactctggtggccaccaagtgcctgcttcccagcgagagcccgcc
atgtctttggtgacactcacccctcccacatcacccgaagaggcgcagacagtggactct
cactcggctcagaagtgggttaagatgccttcatcatctgatgcttttagcgtggataga
acaagtcaccacggaggaaagattccacgccggctagccagtcagatggtggagcgtgtt
tggcaagagtgcaatatcaaccgagcccagaacaagcgaaagtttccagctgcaaccaac
ggtacctgcgaggaggagccaagtgagaaactgggaacctgggattttgtggagtcttca
caaaggtcgtactgcagctgttcgagatacaaattagtgaagcagcgaacagccaataac
acgggccaggctcagtcagctggccagccatcccaacctccgaccaagcacaaaactgga
ggagaaaagccagagaaaggtgacaagcagcagaaaagaccccagacacccttccatcat
cgctgcctggccagcgatgaagcctccatagacaccgaggcaacagctggacaacggctg
gccctgaggagtcaggacggagcaagatttcctagtattcgctctgcagatgtgtctgcc
atccaaaaaggcccccagctccacagtgggggcgttagcactgggccatcagaacaggcc
aactcccctcagcccccaccacttagtccccacccctgtgaacgcagtgaggagtcaggg
gagggcatgaagaacccttcgacccccaatagccaacacttttaccagccgcagccggaa
gcttgcctggtcggtgtgaagggcagcagcgaggagcaaggagggccagaggctctgaat
cagcacttccaatcccatcaacccaacccccaccccggaacctcagcctactccgagcct
cctgagcctaccgtgtatgtgggtgcagcgatcaacctggaggacgacggctcccacgca
ccatggaggttattcaacttaccccgaaggaaagaagccgagctgcccacgccgctgctg
cctggagacaagttgagagaggaggcggccgcatcacaagacaacctggtgtcggtcaca
gaggtgatgtctacatctaaatggccactcaaggtttccgaagagcgcgtgcagatgtat
cgagccaggaggaaccagcatctcgctgctgctgtaacagatggagatcacgagcctgag
gtcgacccctacgcctttgaggaaggagatgtcaagttcacattctccaacaagaaggat
aagtcaggcggggagcgggagccaggaaagaaacacaagggtgaggatggagggaccggt
ccatcagatgatcctcagcgtgcagcgcctcacaaccgcgtggcttccaccagcctgatc
cacgagacggacctggtggtgtccatcaatgacttggacaacctcttcaactcagacgag
gatgagctggcgccgggttccaggcgaccagtgaatggaacggatgggatatttggcaac
aaggaacccaaatcatccatcttggatcccgtaccctgttcagatcatctaatccagatg
tttcccacgcctccctccttggagcagcacatcatgggatactcacctatgaacatgtgc
agcaaggagtactgcaccatggagcccggcacgggcatgacaacagtggaaggcccttca
actctaggggggcacttcaagattgaggtggaggagagcttctgtagccctaagccatct
gagatcaaggactattcttttgtgtacaagccagagctgtgtcagccattcgtagggtgc
tccatgtttgccccgctgaagacattgcccagtcagtgtctcccacctatcaaagtacca
gaggactgcatctaccgaccaagctggaccatgggcagggacatgctcaaccccgtgcct
gtgatgacctaccttaacaaggacagtaacatccccagtgtgggcagcaccatggaccaa
gagtacacccctcaaacccagacgcctttcatgatcaacagcgctccaccaagtaacagt
ggtggcaccggcatcctgccctcacccgccaccccccgcttccgcccctacccacgtacg
cctcgcaccccccgcacgccacgtggcccctccagcgtccagggttcaatcaagtacgag
aattctgacctctgctccccagcggcgtcaaccccctccacctgccgaccgctgaattcg
gtggagccagcaacggtaccctccatccccgaagcccacagcctgtacgtcaccctcatc
ctctccgagacggtcatgaacctcttcaaggactgcaactttgacagctgctgcatctgc
gagtgcaacatgaacatcaaaggagcggatgcgggcgtgtacctgagcgacccagtcagc
gaggcccagaaacagtgcggctgtggcttcagcgccgtggtcaacaggcgctatgggaac
ggctcgggcctcttcctggaggacgagctggacatcatcggccgcggcacggacatcagc
agagaggcagaaaagcgcttcgaggagctgcggctttcctccttggagagaaatggagtt
gggagaagcgaccatatctcggatgagctgattctgctcatgcaggatcagtgcaccaac
cccttttcacccatttcagttctggagcatgacgcagtgactcgggggccaggcggggct
cctatacctccatgtgtacgggtagaggagagggactaccgcagcgactgctacatggcc
atggagcacggcaggcagttcatggacaacatgtcaggtggtaaggtggacgaggcgctg
gtcaagagcacctgtctgcacaactgggccaaacaaaatgcagtggacgtgagtgcgctg
tgctctcaggatgtgctgcgggtgctgatgtccctgcagcctgtactccaggatgcaatc
cagaagaagaggacggtgcggtcatggggcgttcagggtcccctcacctggcagcagttc
cacaagatggctggacggggctcttatggcacagacgagtccccggagcctctacccatc
cccaccttcttagtgggctatgagtatgactttgtggtactgtctccatttggtctgccc
tactgggagaagctgttgctggatcccttcggctcccagcgggacatcggctatctggtt
gtttgtcctgacaacgaggctctgctcagcggcgccaagacgttcttcagagacctcacc
gctgtttatgagtcgtgtcgtctgggacagcaccggcccatttccaaaggctacgctgac
ggcatagtccttgttggtggcagcggagccaagacccccgtggatcagccagtcagtgat
tggttcctcaaggctgccagcagcaacagtgacaccttcgctaagctcaaactctatgca
caagtgtgccgccacaacctcgctccatacctcgcatcacaggcattagacagctctctc
ctcacgcagcccagccccacaccctcatccaaccagtcatcatccacacaactatctaac
tccacctccagcacagccagccagcagggttcagtgaacgctgctggctccactgttccc
agcaacagcgggcccggaaacagctctgcgtcatccaacaaccttgtgacatcgtcaggc
cagaccggcagcacgatacctgccaagcccggctcctttcccccctttgggagcataggc
agccagggccagggaggcggcccccagagtggacagctgggacagcaggctggtacccag
aatactggtgtctcaggggacaactccagcagccaagcccaggggcccacagagcccccc
gagagcactttggagcgagagaaggtgggagtgcccacagatggggagtcccacgctgtc
acgtatccacctgccattgttgtttacattgtggacccctttagctacgaggaggctgac
aggggcgcggggccggtgcccgcacaatccagtgtgtggacgctgggtctgctacgctgc
taccttgagatgcttcagtcgctgcctccacacatccgcaattctgtttctgtacaaatt
attccatgccagtacctgcttcagccagtgcgaggtgaagaccgtcatatctactcccag
cacctcaaatcgctcgcattctcagtgttcgctcagtgcagacggccactgcccacctcg
accaacgtcaaatcactgactggcttcggcccaggcttggccatagacactgcattgaag
agcccagagaggccagagtgtctgcgtctgtacacgccgccgttcatcctggcacctgtg
aaggacaagcagacagagctgggggagacgtttggagaggcatctcagaagtacaacgtg
ctatttgtaggttactgtttgtcccacgaccagcggtggcttctggctacctgcactgat
ctgtatggggagctcctggagacctgcatcatcaacatagatgtaccccacagggcacgg
aggaaaaaggggtcagttcggcgtctcggcttgcagaaactgtgggattggtgtttggga
ctcgtgcagatgacatcccttccctggagggtggtgattggccgactaggcaggatcggg
cacggagagttaaaagactggagcattctgttgaacaggagaaacctgcagtcactgagt
cgacgtctgaaggacatgtgccgaatgtgtggcatctctgcctcagacacccccagcatc
ctcagcgtgtgcttggttgccatggagccacagggatcctttatcatcatgccagactcg
gtgtcgacaggctcggtgtttggccgcagcaccaccttaaacatgcagacgtcgcaactt
agcacgccgcaggacacttcctgcacccacatcctggtcttccccacctctgccatcgtc
caggtcgccagctccaattacaccaacatcgacaccaacatcgacattctcaatcccacc
actgatggctctgatgctatagggatcttggccctgctcgaccaggagaacgatttagtg
gatccagacatcatcaacatctcacctaccacctccccggtacactcccctggctctcat
taccaccacggaggtgatggcagcaagggtcagagtaccgatcgtatggagtcccacgaa
gaagttcctaacctcctgcagcagcctctggcactcggctactttgtctccacggccaaa
gccggcccactacccgactggttctggtcagcctgtccgcaggctcagaaccagtgccca
ctctttctcaaggcctctttgcacctccatgtgtcttcagtgcaatcagatgaactgctg
cacagcaaacactcccaccccctcgactccaatcagacctcagatgtactcagatttgtg
ctggagcagtacaacgccctctcctggctgacatgtgacccggctacgcaagaccgacga
tcgtgtctaccaattcactttgtggtgctcaaccagatgtacaacttcatcatgaacatg
ttgtaa
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