Orcinus orca (killer whale): 101270455
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Entry
101270455 CDS
T05247
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X2
KO
K08528
retinoic acid receptor beta
Organism
oor
Orcinus orca (killer whale)
Pathway
oor05200
Pathways in cancer
oor05222
Small cell lung cancer
oor05223
Non-small cell lung cancer
oor05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101270455 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
101270455 (RARB)
05222 Small cell lung cancer
101270455 (RARB)
05223 Non-small cell lung cancer
101270455 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101270455 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oor03310
]
101270455 (RARB)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101270455 (RARB)
Nuclear receptors [BR:
oor03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
101270455 (RARB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101270455
NCBI-ProteinID:
XP_004271954
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Position
5:complement(3350867..3791667)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFAGQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNTAEHSPSTSPSSVENSGVGQSPLLQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgtcctgtcagtgagtcctgggcaaatcctggatttctacact
gcgagcccgtcttcctgcatgctccaggagaaagctctcaaagcatgcttcagtggattg
acccaaaccgaatggcagcatcggcacactgcgcaatcgattgaaacacagagcaccagc
tccgaggaactggtcccgagccctccgtctccacttcctccccctcgggtgtacaagccc
tgcttcgtctgccaggacaagtcatcggggtaccactacggggtcagcgcctgcgagggg
tgtaaggggtttttccgcagaagtattcagaagaacatgatttacacttgtcaccgagat
aagaactgtgttattaataaagtcaccaggaatcgatgccagtactgtcgactccagaag
tgctttgaagtgggaatgtccaaagaatcggtcaggaatgacagaaacaagaaaaagaag
gagccttcgaagcaggaatgcacggagagctacgaaatgacggccgagctggacgatctc
acggagaagatccggaaagcccaccaggaaaccttcccctcgctctgccagctgggcaag
tacaccacgaattccagtgccgaccatcgagtccgactggatctgggcctctgggacaaa
ttcagtgaactggctaccaagtgcattattaagatcgtggagtttgctaaacgtctgcca
ggcttcaccggcttgaccatcgcagaccaaatcaccctgttgaaggcggcctgtttggac
atcctgattctgagaatctgcaccaggtataccccagagcaagacaccatgacgttttcg
gacggcctgaccctgaatcgaacccagatgcacaacgccgggtttggccccctgaccgac
ctcgtgttcacctttgccggccagcttctgcctctggagatggacgacacggagacaggc
cttctcagcgccatctgcttgatctgtggagaccgtcaggaccttgaggaaccaacaaaa
gtagataagctacaagaaccattgctggaagcactaaaaatttatatcagaaagagacga
cccagcaagcctcacatgtttccaaagatcctcatgaaaatcacagatctccgcagcatc
agtgctaaaggtgcagaacgtgtaattaccttgaaaatggaaattcctggctcgatgccc
cctctcattcaggaaatgctggagaattctgaaggacatgaacccttgaccccaagctcg
agtgggaacacagcagagcacagtcccagcacctcacccagctccgtggagaacagcggt
gtcggtcagtcaccactgctgcaataa
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