Orcinus orca (killer whale): 101274269
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Entry
101274269 CDS
T05247
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04512
ECM-receptor interaction
oor04514
Cell adhesion molecules
oor04820
Cytoskeleton in muscle cells
oor05205
Proteoglycans in cancer
oor05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101274269 (SDC4)
04514 Cell adhesion molecules
101274269 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101274269 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101274269 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
101274269 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oor00535
]
101274269 (SDC4)
Proteoglycans [BR:
oor00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
101274269 (SDC4)
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GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
101274269
NCBI-ProteinID:
XP_004273034
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Position
16:15918368..15938896
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AA seq
201 aa
AA seq
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MAPARLLALLWLLVGALAVAAESIRETEVIDPRDLLEGRHFSGDLPDDEDVGVPGQEPHD
FELSGSGDLDDSEDSPIFPEVIHPLVPLDNHIPEKTGLGSRVPTEPKELEENEVIPKRMS
PFGGDEDVSNKVSMSSTAQGSNIFERTEVLAALIVGGGVGILFAIFLVLLLVYRMKKKDE
GSYDLGKKPIYKKAPTNEFYA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgcctgctcgcgctgctgtggctcctcgtgggcgcccttgccgtcgcc
gccgagtcgatccgagaaactgaggtcatcgacccccgagacctcctagaaggccgacac
ttttccggagacttaccggacgacgaggatgttggggtacctgggcaggagccccatgac
tttgagctgtctggctctggagatctggatgactcagaggacagccctatcttcccggaa
gtgatccatcccttggtgcctctagataaccacatacctgagaagacagggcttgggagc
cgggtccccaccgaacccaaggaactggaggagaatgaggtcatccccaagaggatgtca
ccctttggtggggacgaggatgtgtccaacaaggtgtccatgtccagcacagcccagggc
agcaacatctttgagaggacagaggttctggcagctctgattgtgggcggtggcgtgggc
atcctctttgccattttcctggtcctgctgctggtgtaccgcatgaagaagaaggacgag
ggcagctacgacctgggcaagaaacctatctacaaaaaagcccccaccaacgagttctat
gcctga
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