Orcinus orca (killer whale): 101278717
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Entry
101278717 CDS
T05247
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04115
p53 signaling pathway
oor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101278717 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101278717 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oor04121
]
101278717 (COP1)
Enzymes [BR:
oor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101278717 (COP1)
Ubiquitin system [BR:
oor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101278717 (COP1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
101278717 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101278717
NCBI-ProteinID:
XP_004269836
LinkDB
All DBs
Position
1:54870835..55161461
Genome browser
AA seq
735 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPVRPVLVAAAVSGSGGGSGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLL
APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVL
IAANSQGTIKVLELV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagccgccaggccgggtcgggctcagccgggaccagccctggctcctctgcg
gcctcctcggtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgta
gctgcttcggccgcggcgctggggtccggcggggcggcccaggccgcgggctccggcggc
ctcgggggcccggtgcggcctgtgctggtggcggccgcagtgtccggcagtggcggcggg
agcggcggcggggcggtgtccgcgggcctgtcccggctcagctgcgcagccaggcccagc
gccggcgtaggagggagcagctccagcctagggagcggcagcaggaagcgacctctgctt
gcccccctgtgcaacgggctcatcaactcctacgaggacaaaagcaacgacttcgtctgc
cctatctgctttgatatgattgaggaagcatacatgacgaagtgtggccacagcttttgc
tacaagtgtattcatcagagtttggaggacaataatagatgtcccaagtgtaactatgtt
gtggataatattgaccatctgtatcctaatttcttggtgaatgagctcattctcaaacag
aagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggc
cacaggtggcaaatatttcaggatttgttgggaactgaccaagataatcttgatttggcc
aatgtcaacctcatgttggagttactagtgcagaagaagaaacaactggaagcagaatca
catgcagcccaactacagatccttatggaattcctcaaggttgcaagaagaaataagaga
gagcaactggagcagattcagaaggagttaagtgttttggaagaggatatcaaaagagtg
gaagaaatgagcggcttatactctcctgtcagtgaggatagcacagtgcctcaatttgaa
gctccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggt
ttcagtggcagttctcagacaaagaaacagccctggtataacagcacattagcatcaaga
cgaaaacgactcactgctcattttgaagacttagagcaatgttacttttctacaaggatg
tctcgtatctcagatgacagtcgaactgcaagccagttggatgaatttcaggaatgcttg
tccaagtttactcgatataattcagtacgacctttggctacattatcatatgctagtgat
ctctataatggttccagcatagtttctagtattgaatttgaccgggattgtgactacttt
gcaattgctggggttacaaagaagattaaagtctatgaatatggcacagtcattcaggat
gcggtggatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatc
agttggagtagttaccataagaacctgttagccagcagtgattatgaaggcaccgtcatc
ctatgggatggattcacaggacagaggtcaaaggtctatcaggagcatgagaaaaggtgt
tggagtgttgactttaatttgatggatcctaaactcttggcttcgggttctgatgatgca
aaagtgaagctatggtctaccaacctagacaactcggtggcaagcattgaggcgaaggct
aacgtgtgctgtgttaaattcagcccctcttctagataccatctggctttcggctgtgca
gatcactgtgttcactactatgatcttcgtaacactaaacagccaatcatggtattcaaa
ggacaccgaaaagcagtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgct
tcaacagacagccagctaaagctgtggaatgtagggaagccatactgtctacgttccttc
aagggtcacatcaatgaaaaaaactttgtaggcctcgcttccaatggagattatatagct
tgtggaagtgagaacaactctctttacctgtactataaaggactttctaagactttgcta
acttttaagtttgatacggtgaaaagtgttctggacaaagaccgaaaagaagatgataca
aatgagttcgttagtgctgtgtgctggagggcactgccagatggggagtccaatgtgctg
attgctgctaacagtcagggtacaattaaggtgctagagttggtatga
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