Orcinus orca (killer whale): 101279335
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Entry
101279335 CDS
T05247
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X6
KO
K09103
early B-cell factor
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101279335 (EBF1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101279335 (EBF1)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
101279335
NCBI-ProteinID:
XP_004281016
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Position
3:50884852..51279824
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AA seq
591 aa
AA seq
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MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHSQ
LPALTNTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTN
YNSVTTSMNGYGTAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGI
FSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccaacggagtggaagcagcatgaaggaagagccgctg
ggcagcggcatgaacgcggtgcggacgtggatgcagggcgccggggtgctggacgccaac
acggcggcgcagagcggggtgggtctggcccgggctcactttgagaagcagccgccttcc
aatctgcggaaatccaacttcttccacttcgtcctggccctctacgacagacagggccag
cccgtggagatcgagaggacagcctttgtggggttcgtggagaaggaaaaagaagccaac
agcgaaaagaccaataacgggattcactaccggctccagctcctctacagcaatggaata
aggacggagcaggatttctacgttcgcctcattgactccatgacaaaacaagccatagtg
tatgaaggccaagacaagaacccagaaatgtgccgagtgttgctcacacacgaaatcatg
tgcagccgctgttgtgacaagaaaagctgtggcaaccgaaatgagactccctcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaagtgtaaccaaaattgcctaaag
aatgcgggaaacccacgtgacatgcggagattccaggtcgtggtgtctacgacagtcaat
gtggatggccatgtcctggcagtctctgataatatgtttgtccataataactccaagcat
gggcggagggctcggaggcttgacccctcggaaggtacgccctcttatctggaacatgct
actccctgtatcaaagccatcagcccgagtgaaggatggacgacgggaggtgcgactgtg
atcatcataggggacaatttctttgatgggttacaggtcatattcggtaccatgctggtc
tggagtgagttgattactcctcatgccatccgggtgcaaactcctcctcggcacatccct
ggtgttgtagaggtcacattgtcctacaaatccaaacagttctgcaaagggacaccggga
agattcatttacacagcactcaatgaacccaccatcgattatggtttccagaggttacag
aaggttattccccggcaccctggcgaccctgagcgcttgccaaaggaagtgatactcaaa
agggctgcagatctggtggaagcgctgtatgggatgccacacaacaaccaggagattatt
ctgaagagagcagctgacatcgcagaggccctgtacagtgtcccccgcaaccacagccag
ctcccggccctcactaacacctcggtccacgcgggaatgatgggcgtgaattccttcagt
ggacaactggctgtgaatgtctccgaggcgtcgcaggctaccaatcagggtttcacccgc
aactcaagcagcgtatcaccacatgggtacgtgccgagcaccacccctcagcagaccaac
tataactcggtcaccacgagcatgaatggatacggcactgccgccatgtccaatttgggc
ggctccccgaccttcctcaatggctcagctgccaactcgccctatgccatcgtgccatcc
agccccaccatggcctcctccacaagcctcccctccaactgcagcagctcctccggcatc
ttctccttctcaccagccaacatggtctcagccgtgaaacagaagagtgcttttgcgcct
gtggtcagaccccagacctccccacctcccacctgcaccagcaccaacgggaacagcctg
caagcgatatctggcatgattgttcctcccatgtga
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