KEGG   Orcinus orca (killer whale): 101280303
Entry
101280303         CDS       T05247                                 
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X4
  KO
K02084  apoptotic protease-activating factor
Organism
oor  Orcinus orca (killer whale)
Pathway
oor01524  Platinum drug resistance
oor04115  p53 signaling pathway
oor04210  Apoptosis
oor04215  Apoptosis - multiple species
oor05010  Alzheimer disease
oor05012  Parkinson disease
oor05014  Amyotrophic lateral sclerosis
oor05016  Huntington disease
oor05020  Prion disease
oor05022  Pathways of neurodegeneration - multiple diseases
oor05134  Legionellosis
oor05152  Tuberculosis
oor05160  Hepatitis C
oor05161  Hepatitis B
oor05162  Measles
oor05164  Influenza A
oor05168  Herpes simplex virus 1 infection
oor05169  Epstein-Barr virus infection
oor05200  Pathways in cancer
oor05222  Small cell lung cancer
oor05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:oor00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    101280303 (APAF1)
   04215 Apoptosis - multiple species
    101280303 (APAF1)
   04115 p53 signaling pathway
    101280303 (APAF1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101280303 (APAF1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101280303 (APAF1)
  09172 Infectious disease: viral
   05161 Hepatitis B
    101280303 (APAF1)
   05160 Hepatitis C
    101280303 (APAF1)
   05164 Influenza A
    101280303 (APAF1)
   05162 Measles
    101280303 (APAF1)
   05168 Herpes simplex virus 1 infection
    101280303 (APAF1)
   05169 Epstein-Barr virus infection
    101280303 (APAF1)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    101280303 (APAF1)
   05152 Tuberculosis
    101280303 (APAF1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101280303 (APAF1)
   05012 Parkinson disease
    101280303 (APAF1)
   05014 Amyotrophic lateral sclerosis
    101280303 (APAF1)
   05016 Huntington disease
    101280303 (APAF1)
   05020 Prion disease
    101280303 (APAF1)
   05022 Pathways of neurodegeneration - multiple diseases
    101280303 (APAF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101280303 (APAF1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    101280303 (APAF1)
SSDB
Motif
Pfam: WD40 NB-ARC APAF1_C APAF-1-like_WHD ANAPC4_WD40 NBCH_WD40 CARD RMC1_N WD40_like eIF2A Ge1_WD40 CARD_2 Nup160 AAA_16 Utp8 ATPase_2 AAA_22 AAA_18 Hira
Other DBs
NCBI-GeneID: 101280303
NCBI-ProteinID: XP_004269550
LinkDB
Position
11:80389994..80482387
AA seq 1248 aa
MDAKARNCLLQHREALERDVKTSYIMDHMISDGVLTVSEEEKVKNEPTQRQRAAMLIKTI
LEKDNYSYISFYNALLHEGYKDLADLLHRGIPVISSSNGKDSVGITSYVRTVLCEGGVPQ
RPVVFVTRRKLVNAIQQKLFKLSGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEVCFPGG
VHWVSVGKQDKSGLLMKLQNLCTRLDQDENFSQRLPLNIEEAKDRLRILMLRKHPRSLLI
LDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVNM
KKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKKIKKSSSYDY
EALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVNK
SLLFCDRNGKSFLYYLHDLQVDFLTQKNHSQLQDLHKKLITQFQRHFWLHCLSPDQEDCM
YWYNFLAYHMASAKMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHMLDEKDGTVC
ENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYQQAKLKAKQEVDNGMLYVEWINKE
NIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKNLQVFKAETGEKLLEIKAHEDEVL
CCAFSADDRFIATCSVDKKVKIWNSMSGELVHTYDEHSEQVNCCHFTNNSNHLLLATGSN
DCFLKLWALNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSI
NVKQFFLNSEEPHEDMEVIVKCCSWSADGARIMVAAKNKVFLFDIHTSGLLAEIHTGHQS
TVQYCDFSPHNHLAVVALPQYCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSS
DDQTIRLWETKKVCKNSAIALKQEIDVVFQENEVMVLAVDDIKRLQLINGNTGQIDYLTE
AQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRIGHKNTVRHIQFTADAKTLISS
SDDSAIQVWNWQSEEYVFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDF
VCHQDTVLSCDISPDATKYSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSAFSVDSSL
LATGDDNGEIRIWNVSNGELLHLFAPISVEEGAATHGGWVTDLCFSPDSKMLVSAGGYLK
WWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq 3747 nt   +upstreamnt  +downstreamnt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagccctggaaagggacgtc
aaaacatcctacatcatggatcacatgattagtgatggagttttaacagtgtcggaggag
gaaaaagtaaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaacgata
cttgaaaaagataattattcctatatatcattctacaatgctctgctacatgaagggtat
aaagatcttgccgaccttctccatcgtggcattcctgtcatatcttcttccaatggcaaa
gattcagttggaataacttcatatgtaaggacagtcctgtgtgaaggtggcgtaccacag
aggcccgttgtttttgttactaggaggaagctagtgaatgcaattcagcagaagctcttc
aaactgagtggtgaaccgggatgggtcaccatatatggaatggcaggttgtgggaagtct
gtattagctgcagaagctgttcgagatcattctttcttagaagtttgtttcccagggggt
gtgcattgggtttcagttgggaaacaagacaaatctgggcttctgatgaaactgcagaat
ctttgcacacggttggatcaggatgagaatttctcccagaggcttccacttaatattgaa
gaagctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctctgttgatt
ttggatgatgtttgggatccttgggtgttaaaagcttttgacaatcagtgtcagattctt
cttacaaccagagacaagagcgttacagattcagtaatgggtcctaaatatgtagtccct
gtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaatatg
aagaaagcagatttgccagaacaagctcacagtattataaaagaatgtaaaggttcacct
cttgtagtgtctttaattggtgcacttttacgagattttcccaaccgctgggagtactac
ctcagacaacttcagaataagcaatttaagaagataaagaaatcttcatcttatgattat
gaggctttggatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaagat
tattacacagatctttccatccttcagaaagatgttaaggtgcctacgaaggtgttgtgt
atcctctgggatatggaaactgaagaagttgaagacatactgcaggagtttgttaataag
tctctcttgttctgtgatcgaaatggaaaatcatttctttattatttacatgatcttcaa
gtagatttcctcacacagaagaatcacagccagcttcaggatctacacaagaaactaatc
actcagttccagagacatttctggctacattgtctttcaccggatcaggaggactgcatg
tattggtacaattttctggcctatcacatggctagtgctaaaatgcacaaagaactgtgt
gctttaatgttttccctggattggattaaagcaaaaacggagctcgtaggccctgctcat
ctgattcatgaatttgtggaatacaggcatatgttggatgaaaaggatggtacagtctgt
gagaatttccaggagtttttatctttaaatggacatcttcttggacgacagccatttcct
aatattgtacaactgggcctctgtgaactggaaacttcagaagtttatcagcaagctaag
ctgaaggccaagcaggaggtcgataacggaatgctttacgtggaatggataaacaaagaa
aacatcaagaatctctcccgcttggtcgtccgcccccatacagatgctgtgtaccatgct
tgcttttctgaggatggtcaaagaatagcttcttgtggagctgataaaaacctgcaggtt
ttcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtgctt
tgctgtgcattttctgcagatgacagatttatagcaacctgctcagtggataaaaaagtg
aagatttggaattctatgtctggggaactagtacatacctatgacgagcactcagagcaa
gtcaattgctgccacttcaccaacaatagtaatcacctgctcttagccactggttcaaat
gactgcttcctcaaactctgggctctgaatcaaaaagaatgtcgaaataccatgtttggc
catacaaattcagtcaatcactgcaggttttcaccagatgataagcttttggctagttgt
tcagctgatggaacattaaagctttgggatgtgaaatcagcaaacgagaggaagagcatt
aatgtgaagcagttcttcctaaattcagaggagcctcatgaggatatggaagtgatagtg
aaatgctgttcatggtctgctgatggtgctaggataatggtggcagcaaaaaataaagtc
tttctgtttgacattcacaccagtggcctgttggcagaaatccacacaggccatcagagc
actgtccagtactgtgacttctccccccataaccatctggcagtggtggctttgccccag
tactgcgtggagttgtggaatatggactcatgtttaaaagtagctgattgtagaggacat
ttaagttgggtccattgtgtgatgttttctcctgatggatcatcatttttgacgtcttct
gatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgctatagcg
ttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgatggttcttgcagttgat
gatataaaacgtctgcaactcattaatggaaacacaggtcagattgattatctgactgaa
gctcaagtgagttgctgttgcttaagtccacatcttcagtaccttgcatttggaggtgaa
gatggagccattcagattttagaactcctaaacaacagaatcttccaatccaggattggg
cacaagaacactgtacggcacatccagttcacagctgatgcaaagactcttatctcaagc
tctgatgactctgcaattcaggtatggaattggcaatcagaggaatatgtctttctgcaa
gcccatcaggaaactgtgaaagactttagactcttgaaaaattcaagactgctttcctgg
tcgtttgatggaacagtgaaggtatggaatattattactggaagaatagaaaaagacttt
gtctgtcatcaggatacagttctttcttgtgatatttctcctgatgcaaccaagtattct
tctacctctgctgacaagactgcaaagatttggagttttgagctcctttcccctcttcat
gaattgagaggccacaaaggctgcgtgcgctgctctgccttctctgtggacagtagcctg
ttggcaactggagatgacaacggagaaatcaggatatggaatgtctcaaatggtgagctt
cttcatttgtttgctccgatttcagtagaagaaggagctgctactcacggaggctgggtg
actgacctttgcttttctccagatagcaaaatgcttgtttctgctggaggatatcttaag
tggtggaatgttgtcactggggaatcctcacagaccttctacacaaatggaaccaatctt
aagaaaatacatgtgtcccctgacttcaaaacatatgtgactgttgataatcttggtatt
ttatatattttaaagattttagagtaa

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