KEGG   Orcinus orca (killer whale): 101281415Help
Entry
101281415         CDS       T05247                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101281415 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oor03400]
    101281415 (LIG4)
Enzymes [BR:oor01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101281415 (LIG4)
DNA repair and recombination proteins [BR:oor03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101281415 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 101281415
NCBI-ProteinID: XP_004273658
LinkDB All DBs
Position
Unknown
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQRSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIANNNSAQRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGFTQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLASIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNAFKTDVQNCILDGEMMAYNPDTQTFMQKGSKFDIKRMVEDSDL
HTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFTPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHKKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSGMYKTGCTLRFPRIENIRENKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKTKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTNSHPKPNLENRIAEFGGYVVQNPGPDTYCVIAGCENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDRYGDSYFVDTDWNQLKEVFSG
IKNAGEQTPGEMDPVIADLEHRYSWDNTPLSMFRHHTVFLDLYTVINDLSTKIEGARLAV
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
RELQEENQYLL
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcgcaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaacgatgcttgctaagctttatattgagttgcttaacttacct
cgaggaggaaaagatgccctcaaacttctaaactacagaacacctactggaactcgtgga
gatgctggagactttgcgatgattgcatactttgtgttgaaacccagatgtttacagaag
ggaagtttaaccatacagcaagtaaatgaccttttagactccattgccaacaataattct
gcccaaaggaaggacctagtaaagaagagtcttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttactcag
caaactgtgttttctgtctttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttggactcagcgacatttctatc
actttattctctgcatttaaacccatgctggcctctatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggtgagcgtatgcag
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggctcttccccacaggaaggttccctgacaccgttcatccataatgcattcaaa
acagatgttcaaaactgcatcctcgatggtgagatgatggcctataaccctgatacacaa
acttttatgcaaaaggggagtaagtttgatattaaaagaatggtagaagattctgatctg
cacacttgttactgtgtttttgatgtattgatggttaatgataaaaagctaggacaggag
acactgagaaagaggtatgaaattcttaatagtgtttttacaccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaggggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttgaaaattaaaccagagtatgtaaacgggctgatggat
gaactggacatcttaatcgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaaccccctcctggtgaaaaaccatcagtgttt
catactctctgtcgcgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggcccaacactggaagccttttcataagaaagccccacccagttgcattttgtgt
ggaacagagaagccagaggtctacatcgagccttggaactcggtcatcgttcaggttaag
gccacagagattgtccccagtggcatgtataaaactggctgcacgttgcgtttcccacga
attgagaacataagagaaaacaaagaatggcacgaatgtacatctctggaggacttagaa
caactccgagggaaagcctccggaaagcttgcgtctaaacacctttatgtgggtgacgat
gatgaaccacaagaaaaaaagcggaaggctgccccaaagacgaagaaagttattgggatt
attgagcacctcaaagcacccaacctttctaacgtaaacaaagtctctaatatatttgaa
gatgtggagttttgtgtcatgagtggaaccaacagccatccaaagcccaatctggagaac
agaatcgcagaatttggtggttacgtagtccaaaatccaggcccagacacatactgtgtg
atcgcagggtgtgagaacattagagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagcccgagtggctgttagagtgtttagagaccaaaagctgtgtgccatggcagcct
cgcttcatgattcacatgtgcccgtcaacaaaacagcactttgctcgggaatacgaccgc
tacggggatagttactttgtcgatacagattggaaccaactgaaggaagtgttctcggga
attaaaaatgctggtgaacagactcctggggaaatggatcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccgtttttttg
gacttgtatactgttattaatgacttaagcactaaaatcgagggggcaagattagctgtc
acagccctggagcttcaatttcatggagcaaaagtagtttcatgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agggaattacaggaggaaaatcaatatttgctttga

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