Orcinus orca (killer whale): 101289809
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Entry
101289809 CDS
T05247
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101289809 (CHD5)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101289809 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
HDA2-3
ResIII
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101289809
NCBI-ProteinID:
XP_004272373
LinkDB
All DBs
Position
1:208403075..208469189
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLEGFDDFFPEEPVSLPKKKKSKKLKDNR
SKGTRKKKEGSNDELSENEEDLEEKSDSEGSDYSPNKKKKKKLKDKKEKKAKRKKKDDDE
DDNDDGCLKEPKSSGQLMAEWGLDDVDYPFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPVR
KAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVAGLKFRFGGVGSKRKKGSSSEEEQREGSD
LDSASIHSASVRSECSALMGRKSKRRRQKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGSDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGALAASAKKKHGSTPPGDSKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLLPEGPEGKKPGEVISSDPNTPVPASPAHLLP
APLGLPDKMEAQLGYLEEKELGAQKPKKPPEIQALPTALDRAEGEDKHESSDGKERARED
RPEEMEKAQPSPEQLLKEEVLAEKEKILDKLELSLTHSRGDGSDFRPDDTKAEEKEPIET
QQNGDKEEDEEGKREDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYSNSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaaggcttcgatgactttttc
cctgaggagcccgtgagccttcccaagaagaagaagtccaagaagctcaaggacaacagg
tccaaagggacgaggaagaagaaagaggggagcaatgatgagctgtcggaaaatgaagag
gatctggaagagaagtcggacagtgagggcagcgactactccccaaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagccaagcgaaaaaagaaagatgatgatgag
gacgacaacgatgacggatgcctcaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggatgacgtggactacccgttctcggaggccgactatcacacgctgaccaac
tacaaagccttcagccagttcctcaggccactcatcgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgtcctgggcgccaagtggcgagagttcagtgccaacaacccc
tttaagggcagctcggcggcggcagccgcagcagcggtggccgcggccgtggagacggtc
accatcgcgcctccgctggccatcagcccccagcaggcaccccagcctgtgcccgtccgc
aaggccaagaccaaggagggcaaggggcctggagtgaggaagaagatcaaaggctccaag
gatgtgaagaaaaagggcaaagggagaaaggtggccgggctcaagttccgcttcggaggg
gttggcagcaagaggaagaaaggctcctcgagtgaggaggagcagcgggaggggtcggac
ttggacagtgccagcattcacagcgcctccgtgcgctcggagtgttctgccctgatgggg
aggaagagcaagaggaggcgccagaagaagagaattgatgacggtgatggctatgagacg
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcatcctgtgcgacacc
tgcccgagggcctaccacctcgtctgcctggacccagagctggagaaagctcccgagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaaggacgacgac
gacgaggaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtatgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccgctgaagggcaaagtccagcggatcctgcattggaggtggacagagccc
ccagcccccttcatggtggggctgccggggtccgacgtagagcctggcgttccaccaccc
aagcccctagagggcatcccggagagagagttttttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctgcagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggacgagccaccgccctttgactatggctctggcgat
gaggatggcaagagcgagaaaaggaagaacaaagaccccctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatggtccaccgcatcctgaaccac
agcttcgacaaaaagggggatgtgcattacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggagattgacgacattgacatcccctactacgacaacctgaagcaggcc
tactggggccacagggaattgatgctgggggaggacgccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggacgacaaacaggagaagcccccggacacgcccattgtg
gatcccacggtcaagtttgacaagcagccgtggtacatcgactccacgggcggcacactg
cacccgtaccagctggagggccttaactggctgcgcttttcctgggcccagggcaccgac
accatcctggccgatgagatgggtctgggcaagacagtgcagaccatcgtcttcctctac
tccctgtacaaggagggccactccaaggggccctacctggtcagtgcgcccctgtccacc
atcatcaactgggaacgtgagtttgagatgtgggcgcccgacttctacgtggtcacctac
acgggggacaaggagagccgctctgtgatccgggagaacgagttttcgtttgaggacaat
gccattcggagtgggaagaaggtgttccggatgaagaaagaagtgcagatcaaattccat
gtcctgctcacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcctgaacagctacaagatcgattacaagctgctgctgacggggaccccccttcag
aacaacctggaggagctcttccacctgctcaatttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccgcacatgctaaggcggctcaaggctgatgtattcaagaacatg
ccggccaagaccgagctgatcgtccgcgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggtgggaaccaggtg
tcactgctcaacatcatgatggacctgaagaagtgttgcaaccacccttacctcttccca
gtggccgctgtggaggcccctgtcctgcccaatggctcctatgatggcagctctctggtc
aagtcttcagggaagctcatgttgctgcagaagatgctcaagaaacttcgggacgaaggg
caccgtgtacttatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtatgagggctacaaatatgagcggattgatggtggcatcaccgggggcctccggcaa
gaggcgattgacagattcaacgcccctggggcccagcagttctgcttcctcctctcgacc
cgggcaggtggcctgggcatcaacctggccacggcggacacggtcatcatctacgactca
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgtatcacgcag
gtggccaagcgcaagatgatgctaacccacctggtggtgcggcccggcctgggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcacagaggagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggcccgtcacgcccatccct
gatgtccagtcctccaaagggggagccctggccgccagcgcgaagaaaaagcacggcagc
accccgccaggtgacagcaaggacgtggaggacagcagtgtgatccactatgatgatgcg
gccatctccaagctactggaccgcaaccaggacgccacggacgacacggagctgcagaac
atgaacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctccggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aaaggcaagcgcgtccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagacaaccagtccgaatactccattggatccgaggatgaggac
gaggactttgaagaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccctgcccccgcttctcgcccgggttggcggcaacattgag
gtgctgggcttcaacgcccgacagcggaaggcctttttgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgcgggaagagt
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcggagaccttcgcagacggcgtgccccgcgagggcctctccaggcagcacgtg
ctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtc
aatgggaagtacagcaccccggatttgctccctgaggggcccgagggcaagaagccaggc
gaggtcatctcctcggatcccaacacaccagtgcccgccagccctgcccaccttctgcct
gccccgctgggcctgccagacaaaatggaagcccagctgggctacttggaagagaaggag
ctgggggcgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggac
agagcggagggtgaggacaagcacgagagctcggatggcaaggagagggcccgagaggat
cgaccggaggagatggagaaggcccagccctccccagagcagctgctgaaagaagaagtg
cttgctgagaaggagaagattctggacaagttggagctgagcttgactcacagcagaggc
gatggcagtgatttcaggccagatgacaccaaagccgaggagaaggagcccattgaaaca
cagcaaaatggtgacaaagaggaagatgaggaggggaagagggaggacaagatcgggaag
ttcaagttcatgttcaacattgcagacgggggcttcacagagctacacacactgtggcag
aacgaggaacgtgctgctgtgtcctcggggaaaatctacgacatctggcaccggcgccat
gactactggctgctggcgggcatcgtgacgcacggctatgcccgttggcaggacatccag
aacgacccgagatacatgatcctcaacgagcccttcaagtccgagatccacaagggcaac
tacctggagatgaagaacaagttcctggcgcgcaggttcaagctgctggagcaggcgctg
gtcatcgaggagcaactccggagggccgcgtacctcaacatgacccaggaccccaaccac
cccgccatggccctcaatgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtccctcgccgggaacaagcctgccaatgccgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcggatgtgacgcgcctgccctcc
atgctgtcccgcatccccccggtggctgcccgtctccagatgtcagagcgcagcatcctg
agccgcctgaccaaccgagccggggaccccaccattcagcagggcgctttcggctcttcc
cagatgtacagcaacagctttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
