Oceanisphaera profunda: CBP31_12680
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Entry
CBP31_12680 CDS
T04856
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
opf
Oceanisphaera profunda
Pathway
opf02020
Two-component system
opf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CBP31_12680
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CBP31_12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opf03000
]
CBP31_12680
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
opf02035
]
CBP31_12680
Transcription factors [BR:
opf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CBP31_12680
Bacterial motility proteins [BR:
opf02035
]
Flagellar system
Flagellar assembly proteins
Others
CBP31_12680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
FleQ
HTH_50
AAA
Mg_chelatase
AAA_16
bpMoxR
MCM
TIP49
AAA_3
DUF815
AAA_7
AAA_2
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ART83372
UniProt:
A0A1Y0D741
LinkDB
All DBs
Position
2867712..2869169
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AA seq
485 aa
AA seq
DB search
MSFNGCVLIMDHHQERRLRLEAILSFMQVEWRSGSRAEDQTWLQSQPQNLTVLAGDTDVS
LAQLLETFPHHAFISLVDTDCRHANLLGCLNSLTYDELTSLLLQAQHWQPVLATAEQDCR
LHELLIGDSSAMSEVKSLIRQVANKPANVLLLGESGTGKEVIARAIHELSLQAKGPFVPI
NCGAIPAELLESELFGHEKGAFTGAVSARKGRFELAEGGTLFLDEIGDMPLSMQVKLLRV
LQERTFERVGGTRSISAKVRVIAATHRDLEQMIVEQRFREDLYYRLNVFPIEAPALSQRQ
DDIPLLLNELIARHRLTHNAQLSFARDAIESLKKWHWPGNVRELSNLVERMFILCPNQTV
QLADLPIKYRVLSDEQLLTHPFEELDERDALSAIFQSDDDGVSENEADFFDFQATDDFEE
EADFMAPTLSVEGVNLKDMLANIEMDMIAQSLEVNDGVVARAAEHLGMRRTTLVEKMKKY
GISRE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaacggctgcgtcttgattatggatcaccaccaagaacgacgcttgcggctg
gaagccatactgtcttttatgcaggtagaatggcgcagtggcagtcgggcagaagatcaa
acctggttacaaagtcagccacaaaatttgacggttttagccggggacacggacgtttct
ttagcacagttattagaaaccttccctcatcacgcctttattagcttggtcgatactgat
tgtcggcacgctaacttactcggctgccttaattcgctaacgtatgacgaactcacctca
ctgctgttgcaagcacagcactggcaaccggtattggcgactgctgagcaagactgccga
ctgcatgagttattaattggcgacagtagcgccatgagcgaggtaaaaagcctgatccgc
caagtggccaacaagccagctaacgtcttgttgttgggtgagtctggcaccggtaaagaa
gtgatcgcccgcgctattcatgaattatcgttacaagccaaagggccgtttgtgcccatt
aactgcggggctattcctgccgagctattagaaagcgagctgtttggccatgaaaaaggc
gcctttaccggcgccgtatcggcccgtaaagggcgctttgagctggccgaaggcggtacg
ctgtttttagacgaaattggcgatatgccattgtcgatgcaagtaaaattgctgcgggta
ttgcaagaacgcacctttgagcgggtgggcggcacgcgttctattagcgcgaaagtgcgg
gtaatagcagccacgcatcgtgatttagagcagatgattgttgagcagcgctttcgtgaa
gacttgtactatcgcctaaatgtattcccgattgaagcgccggccctgagccagcgccaa
gacgatattccgctgttgctcaatgagttgattgcgcgccaccgactaacccataacgcg
cagttatcgtttgctcgcgatgcgattgagtcgctgaaaaaatggcattggccgggtaac
gtgcgcgaattgtctaacttggtagagcgcatgtttattttgtgccctaaccaaacagtg
cagttagctgatttgcccattaaatatcgggtactgagcgatgaacagctattaactcac
ccctttgaggagctggacgagcgcgatgccttgtcagccatatttcaatctgacgatgac
ggcgtaagcgaaaacgaagcggacttctttgattttcaagccacggacgactttgaagaa
gaagcggactttatggcacctaccttgtctgttgaaggtgtgaatttaaaagacatgctg
gctaacatcgaaatggacatgattgcccagtcgttagaagtgaacgatggtgtggttgcg
agagccgccgaacacctaggcatgcgccgcaccaccttggtagagaaaatgaagaagtac
gggattagtagggaataa
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