Oceanisphaera profunda: CBP31_12980
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Entry
CBP31_12980 CDS
T04856
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
opf
Oceanisphaera profunda
Pathway
opf03030
DNA replication
opf03430
Mismatch repair
opf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP31_12980
03430 Mismatch repair
CBP31_12980
03440 Homologous recombination
CBP31_12980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opf03032
]
CBP31_12980
03400 DNA repair and recombination proteins [BR:
opf03400
]
CBP31_12980
Enzymes [BR:
opf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP31_12980
DNA replication proteins [BR:
opf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBP31_12980
DNA repair and recombination proteins [BR:
opf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBP31_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ART83422
UniProt:
A0A1Y0D786
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All DBs
Position
2932858..2933586
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AA seq
242 aa
AA seq
DB search
MNQQTHARQVILDTETTGINMDSGPHYMGHKVIEIGAVEVVNRRLTGRHYHVYLKPNRKI
DEEAIKVHGITDDFLADKPPFSGQVEEFLDFIRGAELVAHNAPFDVGFLDYELSLIGRKE
RVAELCKVTDTLALARKLYPGKRNNLDVLCTRYGIDNSHRTLHGALLDAEILADVYLLMT
GGQTKLNLQSDSQQQDDRGGIRRLNTARAPLKIIRADAQELQDHEARLDLVMKKGGSCLW
RS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcaaacacatgcgcgccaagtcattttggacacagagaccacgggtatcaac
atggactcgggccctcattacatgggccacaaagtcattgaaattggcgcggtagaggta
gtgaaccgtcgcttaaccgggcgtcattatcatgtgtacctcaaacccaaccgtaagata
gatgaagaagccattaaagtgcacggtatcaccgatgactttttggccgataaaccgcca
ttctctgggcaggtagaggagtttctagactttattcgcggcgctgaattggtcgcccat
aacgcgccctttgacgtgggctttttagattatgagctaagcctcattgggcgcaaagag
cgggtggccgagctgtgcaaagtcaccgataccttagcgctggcccgcaaactctatccc
ggtaagcgaaataacctagacgtgctctgtacgcgatatggcatagataacagccataga
accttgcacggtgcgctcttggatgcggagattttggccgatgtatacctgttaatgaca
ggtggccaaaccaagttaaatttgcaaagcgacagccaacagcaagatgacagaggcggc
atccgccgcttaaatactgcccgtgcgccactcaaaattattcgggccgatgcccaagaa
ttacaagatcatgaagcccgcttagatttagtgatgaaaaaaggaggcagttgtttatgg
cgcagctaa
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