Ochotona princeps (American pika): 101522645
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Entry
101522645 CDS
T07609
Symbol
CTH
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00260
Glycine, serine and threonine metabolism
opi00270
Cysteine and methionine metabolism
opi00450
Selenocompound metabolism
opi01100
Metabolic pathways
opi01230
Biosynthesis of amino acids
Module
opi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101522645 (CTH)
00270 Cysteine and methionine metabolism
101522645 (CTH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101522645 (CTH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101522645 (CTH)
Enzymes [BR:
opi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
101522645 (CTH)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101522645 (CTH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-GeneID:
101522645
NCBI-ProteinID:
XP_004588830
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All DBs
Position
13:60216210..60250860
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AA seq
405 aa
AA seq
DB search
MQKTDASSLDFLPRFQHFATQAIHAGQEPEQWTSHAVVPPISLSTTFKQGAPGRHLGFEY
SRSGNPTRNCLEKAVAALDGAKYSLAFASGLAATVTITHLLKSGDEIICMDDVYGGTNRY
FRQVAAELGLKIFFVDCSKTKLLEAAITPKTKLVWIETPTNPILKITDIEACAQAVHKHG
DIILVVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSVNSENLHNRLRFLQ
NALGGVPSPFDCYLCNRGLKTLQVRMEKHFKNGMAVAKFLESNPLVEKVIYPGLPSHPQH
ELVKRQCTGCPGMITFYIKGTLQHAETFFKNLKFFALAESLGGYESLAELPAIMTHASVP
KNDREILGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPSSGSHN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacagacgcctcttcacttgatttcctgcctcgcttccaacatttcgccacg
caggccatccatgccggccaggaaccggagcagtggacctcccacgctgtggtgcccccc
atctccctatccaccacgttcaaacaaggggcacccggccggcacttgggttttgaatac
agccgttctggaaacccaactaggaattgcttggagaaagcagttgcggctctagatggg
gctaagtacagcttggcctttgcttcgggcttagcagccactgtgactattactcatctt
ttaaaatcaggagacgaaattatttgtatggatgatgtgtatggaggtacaaatagatac
ttcaggcaggtggcagctgaacttggattaaagattttttttgttgattgttccaaaacc
aaattgctagaggcagcaattaccccaaaaaccaagcttgtttggattgaaacacctaca
aatcccatcctgaagattactgacattgaagcttgtgcacaggctgtccataagcatgga
gacattattttggtcgtggacaacacttttatgtcagcatatttccagcggccattggct
ctgggagctgatatctgtatgtattctgcaacaaagtacatgaatggccacagtgatgtc
gtaatgggtttagtgtctgttaattctgaaaacctccataacaggcttcggttcttgcaa
aatgctcttggaggagttccatcgccttttgactgttacctctgcaaccggggtctgaag
acgctgcaggtccgaatggagaaacatttcaaaaatggaatggcagtagcgaagttcctg
gaatcaaatcctctggtggaaaaggttatttatcctggactgccctctcatccgcagcat
gagttggtaaaacgtcagtgcacaggttgcccagggatgatcaccttttatattaagggt
actcttcaacacgctgagactttcttcaagaacctaaagttttttgctctggctgagagc
ctaggaggatatgaaagtcttgctgaacttccggcaatcatgacccacgcatcagtgccc
aagaatgacagggaaatcctggggatcagtgacacgctcattcgactgtctgtgggctta
gaggatgaagaagatctactggaagacttagaccaagctttgaaggcagcacacccttcc
agtggaagtcacaactag
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