Oceanithermus profundus: Ocepr_0672
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Entry
Ocepr_0672 CDS
T01369
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
opr
Oceanithermus profundus
Pathway
opr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ocepr_0672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_0672
Enzymes [BR:
opr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ocepr_0672
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ocepr_0672
RecFOR pathway proteins
Ocepr_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
AAA_14
NTPase_1
TIP49
nSTAND3
TsaE
Sigma54_activ_2
AAA_18
AAA_3
Rad17
Bac_DnaA
AAA_19
RNA_helicase
AAA_33
bpMoxR
MCM
AAA_17
AAA_24
NB-ARC
AAA_PrkA
DUF815
IstB_IS21
NACHT
ABC_tran
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADR36130
UniProt:
E4U840
LinkDB
All DBs
Position
complement(673126..674112)
Genome browser
AA seq
328 aa
AA seq
DB search
MELDLTLRPERLDDYVGQERLKAKLAVYLQAARQRGEPLDHLLLFGPPGLGKTTLAHVIA
AELGVNIRVTSGPAIEKPGDLAAILTNSLEEGDVLFIDEIHRLSRTAEEHLYPAMEDFKI
DIVIGQGPAARTIRLDLPRFTLIGATTRPGLISGPLRSRFGIVEHLEFYSEEELARGVER
DARLMGIAVEREAALEIGRRSRGTMRVAKRLFRRVRDYAEVAGEEVVSLARTRQALDALG
LDELGLEARDRRILETMIVKFAGGPVGLETLATAMHEDPATLEEVHEPYLIQLGLIQRTP
RGRVATARAYEHLGHPPPEGPRGLFEDA
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtggagctcgacctcaccctgcgccccgagcgcctcgacgactacgtcggccaggagcgg
ctcaaggccaagctggccgtctacctgcaggcggcgcgtcagcgcggcgagccgctggac
cacctgctcctcttcggcccgccggggctgggcaagaccacgctggcccacgtgatcgcc
gccgagctgggggtgaacatccgcgtcacctcgggtccggccatcgaaaaaccgggcgac
ctcgcggccatcctcaccaacagcctggaggagggcgacgtcctcttcatcgacgaaatc
caccgcctcagccgcaccgccgaagagcacctctacccggcgatggaggacttcaagatc
gacatcgtcatcggccaggggccggcggcgcggacgatccggctcgacctgccgcgcttc
accctgatcggggccaccacccgcccggggctgatctcgggccccctccggagccgcttc
ggcatcgtcgagcaccttgagttctacagcgaagaggagctggcccggggggtggagcgc
gacgcccggctgatgggcatcgccgtcgaacgcgaggcggcgctcgagatcggccgccgc
agccgcggcaccatgcgcgtggccaaacgcctcttccgccgggtgcgcgactacgccgag
gtggccggcgaggaggtggtctcgctcgcccgcacccgccaggccctcgacgcgctgggg
ctcgacgagctggggctcgaggcccgcgaccgccgcatcctggagacgatgatcgtcaag
ttcgcgggcggcccggtggggctcgagaccctggccaccgccatgcacgaagacccggcg
acgctggaggaggtgcacgaaccctacctgatccagctcggcctgatccagcgcaccccg
cgcgggcgcgtggccaccgcgcgcgcctacgagcacctgggccacccccctcccgaaggg
ccgcgggggctgttcgaggacgcatga
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