Ornithinimicrobium avium: DV701_00035
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Entry
DV701_00035 CDS
T05559
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DV701_00035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_00035
Enzymes [BR:
orn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DV701_00035
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DV701_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AXH94790
UniProt:
A0A345NID2
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All DBs
Position
complement(6392..7258)
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AA seq
288 aa
AA seq
DB search
MPEGDAVWRTARRLHDGLAGAVLEGSDLRVPTLATADLSGRRTLEVVPRGKHLLHRLEGG
LTLHSHLRMDGRWRVAPAAARYAAAHRHTTRALLWTAGVVAVGDQLGMLDLVRTDEEHRV
VGHLGPDLLDPAFDLEVAVGNLLADPARPLVEALLDQRTVAGIGTIWASEPLFLEGIHPW
TPAGRLGPDRLEALLTRTRRMMVRGCRDGRPLTTGGAGRGEETWVFGRRALPCRRCGTPV
RTGVVGAAPQERMLAYCPVCQDGLAPHDDGAPQQPLGHRPEGPGQGRR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagggtgacgccgtctggcggacggcacggcgcctgcacgacgggctcgccggc
gcggtcctggagggcagcgacctgagggtgcccaccctcgcgaccgccgacctgtccggc
cggcgcacgctcgaggtcgtgccgcggggcaagcacctgctgcaccgtctcgagggcggt
ctcacgctgcactcgcacctgcggatggacggcaggtggcgggtcgccccggccgccgcg
aggtatgccgccgcgcaccggcacaccacccgcgccctgctctggacggccggggtggtc
gcggtcggcgaccagctcggcatgctcgacctggtccgcaccgacgaggagcaccgcgtc
gtcggccacctcggtcccgacctgctcgacccggccttcgacctggaggtggccgtgggc
aacctgctcgccgacccggcgcggccgctggtcgaggctctcctcgaccagcgcaccgtc
gccggcatcggcacgatctgggccagcgagccgctcttcctcgagggcatccacccgtgg
acgcccgcgggccggctggggcccgaccggctcgaggcgctgctcacccggacgcgccgg
atgatggtgcgcggctgccgcgacgggcgaccgctgaccaccgggggcgccggacgggga
gaggagacgtgggtgttcgggcggcgggcgctgccgtgccgacggtgcgggacgccggtg
cgcaccggtgtcgtgggggcggccccgcaggagcggatgctcgcctactgtccggtgtgc
caggacggtctggcgccgcacgacgacggagctccgcagcagccgctggggcaccggccc
gaggggccggggcaaggacgacgatga
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