Ornithinimicrobium avium: DV701_14630
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Entry
DV701_14630 CDS
T05559
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DV701_14630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_14630
Enzymes [BR:
orn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DV701_14630
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DV701_14630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
UreE_N
Motif
Other DBs
NCBI-ProteinID:
AXH97186
UniProt:
A0A345NQ78
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All DBs
Position
complement(3199717..3200697)
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AA seq
326 aa
AA seq
DB search
MRPMLATPGDLRTGPPAGPAWVHEIKWDGIRLLADAADSRLRLLTRSGRDIAVALPELHG
LAQVCDDVLLDGEAVAMVAGRPSFSHVVDRVHTASAVAASRLARTRPVTYMVFDLLRLDG
MDLTGLPWSARRAALEDLLEGVPGVQPSPVFDDGRQLLAATADQRLEGVVSKRRASPYRA
GVRSTDWLKFPHRGRVSVVIGGWRPQTGTVGRLGAVHVGVPVDDGAGRPLRDDTGALRLD
YRGRVGAGLAGRAGEQLQALLVGAPTAPYPFTADIPRPEAAGSTWLEPQVVIDVATLEVT
SDGRLRQPSYQGVRTDLTPEDLLEQT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccatgctggccactcctggcgacctgcgcaccggcccgcccgccggaccggcc
tgggtgcacgagatcaagtgggacggcatccggctgctcgcggacgcggccgacagccgc
ctgcggctgctcacccgctccggccgggacatcgcggtggcgctgccggagctgcacggc
ctggcgcaggtctgcgacgacgtgctgctcgacggggaggcggtcgcgatggtggccggg
cgcccgtccttcagccacgtcgtcgaccgcgtgcacaccgcctctgccgtcgccgcgtcg
cgtctggcccgcacgcgcccggtgacctacatggtcttcgacctgctgcgcctggacggc
atggacctcaccggcctgccgtggtcggcgcggcgggccgcgctggaggacctcctcgag
ggcgtcccgggggtgcagccctcccccgtcttcgacgacggccgccagctgctggccgcg
accgccgaccagcgcctcgagggggtggtcagcaagcggcgcgcgtcgccataccgagcg
ggcgtgcgcagcacggactggctgaagttcccccaccgcggcagggtcagcgtcgtgatc
ggcggctggcgtccgcagaccggcacggtcggccggctcggcgcggtccacgtgggcgtc
ccggtcgacgacggagccggtcgacccctgcgcgacgacaccggggcactgcggctggac
taccgcggaagggtcggcgccggcctggccggtcgcgccggggagcagctgcaggccctc
ctggtcggggcgccgacggcgccgtaccccttcaccgcggacatcccgaggcccgaggcg
gccggctcgacctggctcgagccgcaggtcgtcatcgacgtcgccacgctcgaggtgacc
tccgacgggcggctgcggcagccgtcctaccagggtgtgcgcaccgacctgacccccgag
gacctcctggagcagacatga
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