KEGG   Ornithinimicrobium sp. AMA3305: DV701_14630Help
Entry
DV701_14630       CDS       T05559                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
orn  Ornithinimicrobium sp. AMA3305
Pathway
orn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:orn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DV701_14630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:orn03400]
    DV701_14630
Enzymes [BR:orn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DV701_14630
DNA repair and recombination proteins [BR:orn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     DV701_14630
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C UreE_N
Motif
Other DBs
NCBI-ProteinID: AXH97186
UniProt: A0A345NQ78
LinkDB All DBs
Position
complement(3199717..3200697)
Genome map
AA seq 326 aa AA seqDB search
MRPMLATPGDLRTGPPAGPAWVHEIKWDGIRLLADAADSRLRLLTRSGRDIAVALPELHG
LAQVCDDVLLDGEAVAMVAGRPSFSHVVDRVHTASAVAASRLARTRPVTYMVFDLLRLDG
MDLTGLPWSARRAALEDLLEGVPGVQPSPVFDDGRQLLAATADQRLEGVVSKRRASPYRA
GVRSTDWLKFPHRGRVSVVIGGWRPQTGTVGRLGAVHVGVPVDDGAGRPLRDDTGALRLD
YRGRVGAGLAGRAGEQLQALLVGAPTAPYPFTADIPRPEAAGSTWLEPQVVIDVATLEVT
SDGRLRQPSYQGVRTDLTPEDLLEQT
NT seq 981 nt NT seq  +upstreamnt  +downstreamnt
atgcgacccatgctggccactcctggcgacctgcgcaccggcccgcccgccggaccggcc
tgggtgcacgagatcaagtgggacggcatccggctgctcgcggacgcggccgacagccgc
ctgcggctgctcacccgctccggccgggacatcgcggtggcgctgccggagctgcacggc
ctggcgcaggtctgcgacgacgtgctgctcgacggggaggcggtcgcgatggtggccggg
cgcccgtccttcagccacgtcgtcgaccgcgtgcacaccgcctctgccgtcgccgcgtcg
cgtctggcccgcacgcgcccggtgacctacatggtcttcgacctgctgcgcctggacggc
atggacctcaccggcctgccgtggtcggcgcggcgggccgcgctggaggacctcctcgag
ggcgtcccgggggtgcagccctcccccgtcttcgacgacggccgccagctgctggccgcg
accgccgaccagcgcctcgagggggtggtcagcaagcggcgcgcgtcgccataccgagcg
ggcgtgcgcagcacggactggctgaagttcccccaccgcggcagggtcagcgtcgtgatc
ggcggctggcgtccgcagaccggcacggtcggccggctcggcgcggtccacgtgggcgtc
ccggtcgacgacggagccggtcgacccctgcgcgacgacaccggggcactgcggctggac
taccgcggaagggtcggcgccggcctggccggtcgcgccggggagcagctgcaggccctc
ctggtcggggcgccgacggcgccgtaccccttcaccgcggacatcccgaggcccgaggcg
gccggctcgacctggctcgagccgcaggtcgtcatcgacgtcgccacgctcgaggtgacc
tccgacgggcggctgcggcagccgtcctaccagggtgtgcgcaccgacctgacccccgag
gacctcctggagcagacatga

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