Odobenus rosmarus divergens (Pacific walrus): 101364104
Help
Entry
101364104 CDS
T05148
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oro03009
]
101364104 (PDCD11)
Ribosome biogenesis [BR:
oro03009
]
Eukaryotic type
90S particles
Other 90S particles
101364104 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
Spt6_S1
TPR_14
Suf
TPR_19
TPR_15
TPR_6
NRDE-2
Motif
Other DBs
NCBI-GeneID:
101364104
NCBI-ProteinID:
XP_004402058
UniProt:
A0A2U3W220
LinkDB
All DBs
Position
Unknown
AA seq
1871 aa
AA seq
DB search
MEESFPRGGTRRTHKSEKTLQQSVEQDNLFDISTEEESTKRKKSQKGPAKIKKLKTEKRE
SSKSVKEKFEILNIESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKL
SEQVAQEEPLKDLVSLPELFLPGMLVRCVVSSVGITERGKKSVKLSLNPKNVNEVLSAEA
LKPGMLLTGTVSSLEDHGYLVDIGVCGARAFLPLQKAQEYIRQKNKGAKLKVGQYLNCII
EEVKGNGGVVGLSIGHSDVSTAVATEEQNWTLNNLLPGLVVKAQVQKVTPVGLTLNFLSF
FTGLVDFMHLDPKKAGTYFSNQTVRACVLCVHPRTRAVRLSLRPVFLQPGRSLTRLSCQH
LGAVLDEVPVQRFFSKAGATFRLKDGALAYARLSHLSDSKNVFNAEAFKPGNTHKCRIID
YSQMDELALLSLRTSIIEAQYLRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLIPPM
HLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPAITCYADAKPGL
QTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYAGQVVKVAVLNCEPSK
ERMLLSFKLLGDPKKEPPGHSQKKRRTVSLGQLVDVKILEKTKDGLEVAVLPHNIPAFLP
IPHLSDHVANGPLLYHWLQAGDTLHRVLCLSQSEGRVLLCRKPALVSSVEGSQDPKSFAE
IHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTT
VDEEKQRMLLSLRLSDCGLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTP
GMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASRYHRAGQEVEPGQKKKVVILNVDMLKLE
VHVSLCHDLVNRKAKKLKKASEYQAIVQHLEESFAIASLVETGHLAAFSLTSHLNDTFRF
DSEKLQVGQGVSLTLKTTEPGVTGFLLAVEGPAAKRTVRQTRKDSETVDEDEEADPALVV
GAVKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDEVPVGTSPTAKLKVG
KTVTARVIGGRDMKTFRFLPISHPRFIRTIPELSVRPSELEKDGCTALNTHSVSPLEKIK
QYQAGQTLICFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQALK
ATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPFGKIGRVSVFHVS
DSYTETPLEDFIPQKVVRCYVLSTTGHVLTLSLRSSRTNPETKSKITDPEINSIQDIQEG
QLLRGYVKSVQPHGVLFGLGPSVVGLARYPHVSQYSPSKKALYNRYLPEGKLLTAKVLSL
NRQQNLLELSFLPGDTGKPDVFPASLGLPLLKQEEREMESEEKECKGEEEKEKKNQKRKG
KRNQEGQEEVQLPGKEKSEPQKPQAKKQGKRRRRESASEQERGDKKQKKAAPSEEDDSGV
EVYYREGEDEVEEMSVLPKEKPTRPAEVPRLQLSSAFVWDVGLDSLTPALPPRGESSDSE
EDDRPQQSTQKKSRKERMLEKQNAEKELSRIEEALMDPGRQPESAHDFDRLLLSSPNSSI
LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV
FERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRGQ
AGASHRVMQRALECLPNKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSV
YIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE
YVEAKSSVLED
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaagcttcccccgagggggtacacgaaggacccacaaatcagagaaaactttg
cagcagtcagttgaacaagacaacttatttgatatttctactgaagaggaatccaccaaa
aggaaaaagagccagaaagggccagcaaaaataaaaaagttgaaaaccgaaaagagagaa
agcagcaagtctgtaaaagagaagtttgaaatccttaatattgagtccctgtgtgagggg
atgcggattttgggttgtgtgaaggaggtaaatgaactggaactggtgattagtctcccc
aacggactccagggctttgtgcaagtaactgaaatttgtgatgcctataccaaaaagctg
agtgagcaggtggctcaagaagaacctctgaaggacctggtcagcttgcctgaactcttc
ttacctgggatgctggtgagatgtgtggtgagcagtgtgggtatcacagagaggggcaaa
aagagcgtcaagctatctctgaaccccaaaaatgtcaacgaagtgctaagtgctgaggcc
ctgaagcctggcatgctgctcacaggcactgtgtccagcttggaagaccatggctaccta
gtggacattggggtttgtggggccagagcctttctgccactgcagaaagcccaggagtat
atccgacagaagaacaaaggtgctaaactgaaggtgggtcagtacctgaactgcatcatt
gaagaggtgaaaggcaatggaggagttgttggtctgtctattggtcattctgatgtttct
actgccgttgctactgaggagcaaaactggacccttaataacttgctaccaggactggtg
gtcaaagcccaggtacagaaggtgactccagttggccttacactaaacttcctctcattc
ttcaccggcctggttgactttatgcacctggatcccaagaaagctggaacctatttctca
aatcaaacagtaagggcttgtgttctctgtgtccatcctcggaccagggccgtgcggctg
agcctgcgtcccgtcttcctgcagccggggcgctcactcactcggctctcttgccagcac
ctgggagctgtgctggatgaggttcctgtccagaggtttttcagcaaggccggggccacc
ttcaggctgaaggatggggcgctggcctatgcccggctcagccatctctctgattctaag
aatgtcttcaatgctgaggccttcaagccggggaacactcacaagtgtagaatcatcgat
tacagccaaatggatgagctggccttgctctctctgaggacgtccattattgaagctcag
taccttagatatcatgacatcaaacctggggcattggtaaagggcacagtgctgaccata
aagccatacgggatgctggtgaaggtgggcgagcaaatcaggggcctgatacctcctatg
cacctggccgacatcctgatgaagaatccagagaagaagtaccacattggggatgaggtc
aagtgccgggttttgctttgtgatcctgaagccaaaaagctgatgatgaccctgaagaaa
accctaattgagtctaaactgcctgccattacctgctatgccgatgccaagcctggtctg
cagacacatggcttcatcctcagggtcaaggactatggctgcattgtgaagttctacaat
gatgtgcagggactggtgcctaagcatgagctcagtgccgagtatgtccctgacccagag
agggtcttttatgctggccaggtggtgaaggttgcggtgctgaactgtgagccatccaaa
gagaggatgcttttgtccttcaagctgttgggtgatccaaagaaagagcctccgggacac
agtcagaagaaaagaaggactgttagtcttggacagttggtggatgtgaagattttagag
aagaccaaagatgggctggaggtggctgtcctgccccacaacatccctgctttcctcccc
atacctcatctgtcggaccacgttgccaatggccctctgttgtatcactggctccaggct
ggcgacacccttcacagagtactttgtctgagccagagtgagggacgtgtcctcctttgt
aggaagccagctttggtgtccagtgtggagggtagccaggatcctaagagcttcgcagaa
atccatcctgggatgctgctcatcggttttgtgaagagcatcaaggactacggtgtgttc
gtccagttcccgtcaggtcttagtggactggcccccaaagctatcatgagtgacaagttt
gtgacttccacaagtgaccactttgtcgaggggcagacggtggttgcaaaggtgaccacc
gtggacgaggagaagcagcgcatgctgctgtcgctgcggctgtcggactgtggtctgggg
gacctggctaccaccagcctcctcctcctgagccagtgcctggaagagcggcagggtgtg
cgcagcctcatgagcaaccgagactctgtgttgatccagacgttggctgagatgacccct
gggatggtccttgacctagaggtgcaggaggtgttggaggatggctctgtggtgttcagt
gagggccccgtgcctggcctggtcctgagggccagcagatatcatcgggcagggcaagag
gtggaacctgggcagaaaaagaaggttgtcatcttaaatgttgatatgttgaagttggag
gtacatgtttccctttgccacgacttggtgaatagaaaagctaaaaagctgaagaaagcc
agcgagtaccaggcgattgtgcagcacttggaggagtcctttgctatcgcctccttggta
gagactggccacctggcagctttctccctgacctctcacctcaatgacaccttccgcttt
gactcagagaagttgcaggtgggacagggtgtctccctaaccctcaagaccacagaacca
ggagtgactggttttcttttggctgttgaggggccagctgctaagaggactgtgagacag
acccggaaggactctgagacagtcgatgaggacgaggaagcagatccagctctggttgtg
ggggctgtaaagaagcacaccctctccattggggacatggtcacaggcactgtcaagtcc
attaagcccacccatgtggttgtaaccctggaagatggcatcattggctgtattcacgcc
tcccacattctagatgaagttccagtgggcacatctcctactgccaagctgaaagttggg
aagacagtcactgcccgagtgattggtggtcgagacatgaagacgttcaggtttctccca
ataagtcatcccagatttattcgaaccattccggagctgagtgtccggccaagtgagctg
gagaaggatggctgcactgctctcaacactcactctgttagccccttggagaagattaaa
cagtaccaggctggacagactttgatttgcttcttgaagaagtacaacgtggttaagaaa
tggcttgaggtggagattgctccagacatccggggcaggattcccttgttgctcacttct
ctcagcttcaaggttctgaaacatccagataagaagttccggattggccaggccctgaag
gctactgtggttggcccagattcttccaaggccttcttgtgtctctcacttataggtcct
cacaagcttgagaagggggaagtcgccatgggccgagtggtgaaggtgactcctaaggag
gggctgaccgtctccttcccctttgggaagatcggaagagtcagtgtatttcatgtgagt
gactcctacacagagacgcccctggaagacttcatcccccagaaggttgtcaggtgttac
gtcctgtctactacaggccatgtgttgactctgtcactgcgctcgtccaggacaaacccg
gagacgaagagcaaaataaccgatcctgagattaactccatccaggacattcaggaaggg
caactcctgaggggctatgtgaagtctgtccagccgcatggcgtgctcttcggccttggc
ccctccgttgtgggtttggcccgatatccgcatgtctcccagtacagtccatccaagaaa
gccctttacaacagatacctcccagaagggaagctgctcacagccaaggtcctgagcctg
aaccgccaacagaacctgctagagctgtcattcctccccggtgacactgggaagccggac
gtgtttcctgcctccctagggctgccacttctaaagcaagaggagagggaaatggagtca
gaagagaaagagtgcaaaggagaagaagagaaggagaagaagaatcagaaaaggaaaggg
aagaggaaccaggaggggcaggaggaggtgcagctgcctggcaaggagaagagtgagccc
cagaaaccgcaagcaaagaagcagggcaagcggcggcgccgggagtctgcaagcgaacag
gagagaggggacaagaagcagaagaaggctgctccgtcagaggaggacgacagtggtgtt
gaagtttattatcgggaaggggaagacgaggtagaagagatgagtgtgttgcccaaggag
aagccgaccaggccagcagaagtgccccggctacagctgtcctctgctttcgtttgggac
gtgggactagactctctgaccccagccttaccacctcgaggcgagagctcagacagcgag
gaggacgacagacctcagcagtccacgcagaagaagagcaggaaggaaaggatgctggag
aagcagaacgcagagaaagagctgtcccgcatcgaggaggcactgatggatcctgggcga
cagccagagtcagcacatgattttgaccgactcttgctgagctcccccaacagctccatc
ctgtggctgcagtacatggccttccacctgcaggccacggaaatcgagaaggcccgggct
gtggctgagagggctctcaagaccatttccttcagagaggagcaagagaagctgaacgtg
tgggtggcactgctgaatctagagaacatgtacggctctcaggagtcactgaccaaggtc
tttgagcgggccgtgcagtacaatgagcctctcaaggtctttctccatctggctgacatc
tataccaagtccgagaaattccaggaagctggtgaactttacaaccggatgctgaagcga
ttcaggcaggagaaagctgtctggatcaaatatggcgcctttcttctgcggaggggccag
gctggggccagtcaccgtgtgatgcagcgagctctcgagtgtctgcccaataaagagcat
gtggatgtgattgccaagtttgcccagctggagttccagctgggggatgcggaacgggcc
aaagccatttttgagaacacactgagcacctacccaaagcgcactgatgtctggtcggtt
tacatagacatgaccattaagcatggcagccagaaggaagtccgggacatctttgaacgg
gtcattcatctcagtctggcccccaagcgaatgaaattcttcttcaagcgctacctggac
tatgagaaacaacatggcactgagaaggatgtgcaggcagtaaaggcgaaggccctggaa
tacgtggaagctaagagctccgtgttggaggattag
DBGET
integrated database retrieval system