KEGG   Odobenus rosmarus divergens (Pacific walrus): 101376929Help
Entry
101376929         CDS       T05148                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101376929 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oro03400]
    101376929 (LIG4)
Enzymes [BR:oro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101376929 (LIG4)
DNA repair and recombination proteins [BR:oro03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101376929 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT APG17
Motif
Other DBs
NCBI-GeneID: 101376929
NCBI-ProteinID: XP_004406013
UniProt: A0A2U3WC19
LinkDB All DBs
Position
Unknown
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQRSRGRAEKIRHFREFLDSWRRFHDALHKNQKDV
RDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGPRG
DAGDFATIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAVELHNVTTDLEKVCRQLHDPSIGLSDISI
TLFSAFKPMLAAMADTEQIEKAMKHQSFYIETKLDGERMQMHKQGDAYQYFSRHGFNYTD
QFGNSPQEGSLTPFIHSAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVEDSEL
QTCYCVFDVLMVNNKKLGHEILKKRYEILTSVFTPVPGRIEMVQKTQAHTQKEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFHRKAPPSNILC
GTEKPEVYIEPCHSVIVQVKATEIVPSDMYKTGCTLRFPRIERIREDKEWRECTTLDDLE
QLRGKASGKLASKHLYVGDDDGPQEKKRKAAPKVKKAIGIIEHLKAPNLSNVNKISNIFE
DVEFCVMNGMDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSNKHDV
VKPEWLLECFKTKSCVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSSAQTPGEMASVIANLEYRYSWDRSPLSMFRHHIIYLDLYAVINDLSTKIEGTRLAV
TALELRFHGAKVVSRLAQGVSHVIIGEDQSRVADLKAFRRTLKRKFKILQQGWVTDSIDK
CELQEENLYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacagacttcgcaaactgttgcatctcacgttccttttgcagacttgtgt
tcaactttagaacgaatacagagaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaagatttcacgatgcccttcataagaaccaaaaggatgtc
agggactccttttatccagcaatgagacttattcttcctcagctagaaagagagaggatg
gcctacggaatcaaagaaactatgcttgctaaactttatatcgaattgcttaatttacct
aaagaaggaaaagacgcccttaaacttttaaattatagaacgcccaccgggcctcgtgga
gatgctggagactttgcaacaattgcatattttgtgttgaaaccaagatgcttgcagaaa
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccagaagaaaggacctaataaagaagagtcttcttcagctaataagtcagagttcagca
ctggaacaaaagtggcttatacggatgattgtaaaggacttaaaacttggtttcagtgag
cagtctgtattttctgttttccataatgatgctgtcgagttgcataatgtcaccacagat
ctggagaaagtctgtaggcaactgcatgatccttccataggactcagtgacatttccatc
actttattctctgccttcaaaccaatgctggctgctatggcagatactgagcaaatcgag
aaggccatgaaacaccaaagtttctacattgaaaccaagctagacggtgagcgtatgcag
atgcacaaacagggggatgcgtatcagtacttctcccgacatggttttaactatacggat
cagttcggcaattctccccaggaaggttctctcacaccgttcattcacagtgcatttaaa
acagacgtacagatctgtatcctggatggagagatgatggccttcaatcctaacacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggtggaggattctgagctg
caaacttgttattgtgtgtttgatgtactgatggttaataataaaaagctaggacatgag
atcctgaaaaagaggtatgaaattcttactagtgtttttacaccagtaccaggtagaata
gaaatggtgcaaaaaacacaagctcatactcagaaagaagtgatcgacgctttgaatgaa
gccatagataaaagggaagagggaatcatgataaaacagcctctgtctatttacaagcca
gacaaaagaggcgaaggatggttgaaaattaaaccagagtacgtggacgggctgatggat
gagctggacatcttaattgtcgggggctactggggtaaaggttcccgaggtgggatgatg
tctcattttttgtgtgctgtagcagagaagcctcctcctggtgaaaaaccgtcagtgttt
catactctgtgtcgtgttggttcgggttataccatgaaagagctgtacgatctgggtttg
aaattggcccagcattggaagccttttcatagaaaagctccaccaagcaacattttgtgt
ggaacagagaagcctgaggtgtacatcgagccttgtcattctgtcattgttcaagtgaag
gccacagagatcgtccccagtgatatgtataaaactggctgcacactgcgttttccacga
atcgagaggataagggaagacaaagagtggcgcgaatgcaccaccctggatgacttagaa
cagcttcgtgggaaagcatcggggaagcttgcatccaaacacctgtacgttggggatgat
gacggaccacaggagaagaagaggaaagctgccccgaaggtgaagaaagctattggaatt
atcgagcacttaaaagcacccaacctttctaatgtaaacaaaatttctaatatatttgaa
gatgtggagttctgtgtcatgaacggaatggacagccatccgaagcctgatctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggtccagacacgtactgcgtg
attgcagggtccgagaacatcagagtgaaaaacataatttcttcgaataaacatgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccgtggcagcct
cgctttatgattcatatgtgcccatcaacaaaggaacattttgcccgtgaatatgactgt
tacggtgacagttattttgttgatacagatttgaaccaactgaaggaagtgttctcagga
attaaaaattccagcgcacaaactcctggagaaatggcttctgtgattgctaatttagag
tatcggtattcctgggaccgttcccctctcagtatgtttcgacaccacattatttatttg
gacttgtatgctgttattaatgacttgagtaccaaaatcgagggaacgagattagctgtt
acagctctggagcttcgatttcatggagccaaagtagtttctcgtttagctcagggagtg
tctcatgtaatcattggggaggatcagagtcgtgttgcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaaggttgggtaactgattcaatagacaag
tgtgagttgcaggaggaaaatctatatttggtttaa

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