KEGG   Odobenus rosmarus divergens (Pacific walrus): 101377948Help
Entry
101377948         CDS       T05148                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03410  Base excision repair
Module
oro_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:oro00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    101377948 (LIG3)
Enzymes [BR:oro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101377948 (LIG3)
DNA repair and recombination proteins [BR:oro03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101377948 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme HD_2 Synaptonemal_3
Motif
Other DBs
NCBI-GeneID: 101377948
NCBI-ProteinID: XP_004416856
LinkDB All DBs
Position
Unknown
AA seq 999 aa AA seqDB search
MTLTFKILFPPTLRALRRKELCLFRQQHHWPDRRQFSHWSETDLLHGHCLLQRRKPALSF
QEGHLRPRATCLVLPGAHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQH
IADLSSKATGTPKKKAVVQAKLTATGQVTSPVKGASLVTNSNPRKFSGFSAKPNNSGGAR
PSPPPKASLSSSRCDPKHKDCLFREFRKLCAMVAENPSYNTKTQIIQDFLRRGSAGDSFH
GDVYLTVKLLLPGVIKSVYNLNDKQIVKLFGRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRALSVQASLMTP
VQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKKGDHFNYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKAADLADMINRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSS
QKWCTVTKCSGGHDDATLSRLQKELDMVKISKDPSKIPGWLKINKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERADFTM
AAQEEGSSTTGGSNGENGGASGPAGTRKASRASPKQPSPGTSKAGGRLSSPSSRGGQQLT
VKGGRKRKAPEEAPEETPCPAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEF
DMASATHVLGSGDKNPEAQQVSPEWIWACIRKRRLLAPC
NT seq 3000 nt NT seq  +upstreamnt  +downstreamnt
atgactttgactttcaagatcctcttcccaccaaccctccgtgcactcaggcgaaaagaa
ctgtgcctattccgacagcaacatcactggcctgacagaagacagttcagccattggtca
gaaacagatttgcttcatgggcactgcctcctccagagaagaaagcctgctctgtcattc
caggaaggccatctaagaccacgtgccacctgccttgttttgccaggggcgcatgtggga
ctctgcagtggcccctgtgagatggccgagcaacgattctgtgtggactatgccaagcgc
ggcacggcgggctgcaaaaagtgcaaggaaaagattgtgaagggggtgtgccggattggc
aaagtggtgcccaaccccttttcagagtccgggggtgatatgaaagagtggtatcacatt
aaatgcatgtttgagaaactggagcgggcccgggctaccacaaaaaaaatcgaggacctc
acagagctggaaggctgggaagagctggaagacaatgagaaggaacagataagccagcac
attgcagatctgtcttctaaggcaacaggcacaccaaagaagaaagccgtcgtgcaggct
aagctgacagccactggccaggtgacctctccagtgaaaggtgcctcacttgtcaccaat
agcaatccccggaaattttctggtttttcagccaagcccaacaactctgggggagcccgc
ccaagccctccccctaaggcaagtctgtcctcaagcagatgtgaccccaagcacaaggat
tgtctgtttcgcgagtttcggaagttgtgtgccatggtggctgagaatcctagctacaac
acgaagacccagatcatccaggactttcttcggagaggttcagcaggagatagtttccat
ggcgacgtgtacctgacagtgaagttgctgctgccgggtgttattaagagtgtttacaac
ttgaatgataagcagatcgtgaagcttttcggccgcattttcaactgcaacccagatgat
atggcacgagacctagagcagggcgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagcctccttactatccaggaggtggatgaattc
ctccttcggctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggacatc
gcctccaggtgtacagccaatgacctcaagtgtatcatcaggttgatcaaacatgatctg
aagatgaactcgggtgcaaagcacgtgttagatgcccttgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggacgtggtggagcgggtcctccgcaatgagcaggag
gtggagaaggagccaggccggagacgagctctgagcgtccaggcttccctgatgacgcca
gtgcagcccatgctggccgaggcctgcaagtccatcgagcacgcgatgaagaagtgtcct
aacggcatgttctctgagatcaagtacgatggggagcgagtgcaggtgcataagaagggg
gaccacttcaactacttcagccgcagcctcaagcctgtcctgcctcacaaggtggctcac
ttcaaggactacatcccccaggctttccccgggggccacagcatgatcttggactctgag
gtgctcctgattgacacgaagacaggcaaaccactgccctttgggactctgggagtgcac
aagaaagctgccttccaggatgctaatgtttgcctatttgtttttgattgtatctacttc
aacgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgataac
atggttgaaattcccaaccggatcatgttctcagaaatgaagcaagtcactaaagctgcg
gacttggccgacatgataaaccgggtcatccgagaggggctggaagggctggtactgaag
gacgtgaagggtacatatgagcctggaaagcggcactggctgaaggtgaagaaagactat
ttgaacgagggggccatggcggacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagcagc
cagaagtggtgcacagtcaccaagtgttcaggaggccacgatgacgcgaccctctcccgc
ctgcagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccggctgg
ctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagctgcc
gtgtgggagatcacgggggctgagttctccaagtctgaggcgcacacggccgacgggatc
tccatccggttcccacgttgcacccgcatccgtgatgataaagactggaaatctgccact
aacctcccccaactcaaggaactgtaccagctgtccaaggagagggccgacttcaccatg
gcggcccaagaggaggggagctccaccacagggggcagcaacggagagaacgggggtgcc
tcggggcctgcggggactcgcaaggcctccagggcctccccgaagcagccctcccccggc
accagcaaggcaggagggaggctgagtagccccagcagcagaggcggccagcagctgact
gtgaaggggggccggaagcggaaggcccccgaggaggcccccgaggagaccccgtgccca
gccaaggtgctgctggacattttcacgggggtgcggctctacctgccaccctccacgcca
gacttcagccgcctcagacgctactttgtggcattcgatggggacctggtgcaggagttt
gacatggcctcagccacacacgtgctgggtagcggggacaagaaccctgaggcccagcag
gtctccccggagtggatttgggcgtgtatccggaaacgaaggctgctggccccctgctag

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