Ornithinimicrobium ciconiae: FNH13_02110
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Entry
FNH13_02110 CDS
T06094
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
orz
Ornithinimicrobium ciconiae
Pathway
orz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FNH13_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orz03400
]
FNH13_02110
DNA repair and recombination proteins [BR:
orz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FNH13_02110
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FNH13_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
AAA_22
SMC_N
AAA_16
DnaJ_CXXCXGXG
nSTAND1
AAA_23
NACHT
cobW
DUF4350
MobB
AAA_30
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QDO87272
UniProt:
A0A516G715
LinkDB
All DBs
Position
467943..470474
Genome browser
AA seq
843 aa
AA seq
DB search
MVHVPSLSKNGCEDGRVSIHVHGARLHNLRDVDVEIPRNQLVAITGVSGSGKSSLAFGTI
HGEAQRRYFDSVAPFARRLIHTAIDPQVRDITGLPPAVAIEQRPAAPSSRSSVGTITTTG
NTLRMLWSRSGDYPDDVEPMDSDHFSPNTAVGACPECSGLGVVHRPTEASMVPDPSLSIA
EGAIAAWPGAWLGKNYRDIIATLGHDIDAPWRKLPQETRDWILFTDEQPVVTVVPTRDAD
RINRPYQGTYSSAARYVLRTLSETKSATQRRRALRFVETTPCAVCHGRRLNPDALRVTWQ
DLAIDEAQHLPVGDLLPILRRRLAELPHGDQPLHAERSRAVVAAERLLLTDLVSRLDVLV
TLGLGHLDLARPTPSVSTGELQRLRLATALRSGLYGVVYVLDEPSAGLHPQDVVPLLEVL
RGLVEAGNSVLVVEHDMAVVGACDWVVDVGPGAGSQGGQVLYSGLLDGLAEVAGSVTAHY
LHDPVHPADIREAATRDPSGWLTVTGIERHNLHGVAVEVPLGALTVVTGVSGSGKTSLLH
GILEAVGDRLARVEITEEESDGEYSDGQGQGAGLAGEGGEVVVAAEASATGTGAPTRVVQ
VTQRPIGRTPRSNLATYTGLFDHVRKLFAATRTARERGFTAGRFSFNTAAGRCETCQGEG
AVSVELLFLPGTYSTCPTCGGARYNPETLEVTWSGRSIADVLALTVTDALEVFADEQPVR
RALAALEALGLGYLSLGQSATELSGGEAQRIKLATELQKERRSPTLYLMDEPTSGLHPAD
VHRLLATLHALVDAGHTVVLVEHDPAALATADWVMELGPGSGEAGGVVMTAGLVAAAGSE
SAT
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
gtggtccacgtgccaagcctctccaagaatgggtgtgaggatgggcgggtgtccatccat
gtccacggcgcccggctgcacaacctgcgtgacgtcgacgtcgagattccacgcaaccag
ctggtcgcaatcaccggggtgtcgggatcgggcaagtcgtccctggcgttcgggacgatc
cacggcgaggcgcagcggcgctacttcgactcggtcgcgcccttcgcccgccgcctgatc
cacaccgccatcgacccgcaggtgcgggacatcacgggactgccgccggcggtggccatc
gagcagcgaccagccgcaccgtcctcccggtcctcggtcggcaccatcacgaccaccggc
aacacgctgcggatgctctggtcgcgcagcggcgactatcccgacgacgtcgagccgatg
gactccgaccacttctcacccaacaccgccgtcggggcctgcccggagtgctcgggtctg
ggggtcgtgcaccggccgaccgaggcctcgatggtgcccgacccgagcctgtcgatcgcc
gagggcgcgatcgccgcctggcccggggcgtggctgggcaagaactatcgcgacatcatc
gccacgctcggccacgacatcgacgcaccctggcgcaagctgccccaggagacccgcgac
tggatcctgttcacggacgagcagcccgtggtcaccgtggtgccgacccgggatgccgat
cgcatcaaccggccctaccagggcacctactccagcgcggcgcgctatgtcctgcgcacg
ctcagcgagaccaagagcgccacccagcgacgacgcgcgctgcggtttgtcgagaccact
ccgtgcgcggtctgccacggtcgtcggctcaacccggacgcgctgcgcgtcacctggcag
gacctggcgatcgacgaggcgcagcacctgccggtgggcgacctgctgccgatcctgcgc
cgacggctcgccgagcttccccacggggaccagccgctgcacgcggagcgctcgcgtgcg
gtggttgccgccgagcgcctcctgctcaccgacctcgtctcccgcctcgacgtcctggtc
accctcgggctgggtcacctcgacctggcccgtcccacaccgtcggtctccaccggggag
ctgcagcgcctgcggctggccaccgcgctgcgctcgggcctgtatggcgtggtgtacgtc
ctcgacgagccctccgctgggctgcacccccaggacgttgtcccgctgctggaggtgttg
cgcggactggtcgaggccggcaactcggtgctcgtggtcgagcacgacatggcggtggtg
ggcgcgtgcgactgggtcgtcgacgtgggacccggtgcgggctcgcagggtgggcaggtg
ctgtactccgggctgctggacggcctcgccgaggtcgccgggtcggtcacggcgcactac
ctgcacgacccagtccacccggccgacatccgtgaggcagcgacccgtgatccctccggg
tggctgacggtgaccggcatcgagcgccacaacctgcacggcgtcgccgtcgaggtgccg
ctcggcgcgctcaccgtggtgaccggcgtctccgggtcgggcaagaccagcctgctccac
ggcatactcgaggcggtcggtgaccggctcgcccgggtggaaatcacggaggaggagagc
gacggggagtattccgacgggcagggtcagggggctggcttggcgggggaaggtggtgag
gtggtcgtcgcggcagaggccagcgcgaccgggaccggggcgccgacccgggtggtgcag
gtgacgcaacggccgatcgggcggacgccgcggtccaacctggcgacctataccggcctg
ttcgaccatgtccggaagctgttcgcggcgacacggacggcgcgggagcgcggtttcacg
gccggacgattcagcttcaacaccgcggccgggcggtgcgagacgtgccagggggagggt
gcggtctcggtcgagctgctgttcctgccggggacctattcgacctgtccgacgtgcggc
ggagcgcgctacaaccccgagacgctcgaggtcacctggtcagggcggagcatcgcggac
gtgctggcgctgacggtgaccgacgcgttggaggtctttgccgacgagcagccggtgcgg
cgtgcgctcgcggcactggaggcgctcgggctgggctatctgagccttgggcagtccgcg
accgagctgtccggtggtgaggcacagcgcatcaagctggccactgagttgcagaaggag
cgccgctccccaacgttgtatctgatggacgaaccgacgtccggcctgcacccggccgat
gtgcaccggctgctggccaccctccacgccctggtggacgccgggcacaccgtcgtgctc
gtcgagcacgacccggctgcgctggccacggcggactgggtgatggagctcgggcctgga
tcaggtgaggcgggaggggtcgtgatgactgcggggctggtggccgccgctggatccgaa
tccgccacgtag
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