Oryza sativa japonica (Japanese rice) (RefSeq): 107280903
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Entry
107280903 CDS
T01015
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107280903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
107280903
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107280903
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107280903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107280903
NCBI-ProteinID:
XP_015638509
UniProt:
Q65XQ0
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Position
5
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AA seq
376 aa
AA seq
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MAASSSSSKRRAMGMAASDQGDTSAHAMKKPRVRVAPDSSASEDDTDEDHGHDEGDGGEE
EEEEEEPDGDGEEESQSYQDPLESDGDGVDEEASAGDMAASEPAAPSTRAAVAGVTVEDA
DALECGVCFLLLRPPIFQCEVGHVVCAPCRDTLAPAGRCYVCRVAVAGGEYRRCYALERL
VDAIRVACPHAAHGCAARPAYHDVEAHRLACPHGPCHCPGERCGFVGSTAALLDHFAATH
NWPCTTNVRAREVFDVRLHDGFNFLVVGGASRHHLVMMNMTREPLGRAITVLRIHPHATG
RIQCELSLSRHVVLGDSWGLYRSHYQKSVFDVGCSDLADGLPDAKQCFQFVVPRCVAGDD
DEGGTGIRINVLITVD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctcttccagctcgaagcggcgagccatgggcatggcggcgtcggaccaa
ggtgacacctccgcccacgccatgaagaagcctcgcgtccgtgtcgcgccggattcctca
gcttcggaggatgacaccgacgaggaccatggccatgacgaaggcgacggcggcgaggag
gaggaggaagaagaagaacctgacggtgatggcgaggaggagagccagagttatcaagat
cctttggagtctgatggcgatggtgtggacgaagaggcaagcgccggcgacatggctgcc
tccgagccggcggcgccgtcgacacgcgcggcggtggcgggcgtgacggtggaggacgcc
gacgcgctcgagtgcggcgtgtgcttcctcctgctgaggccgcccatcttccagtgcgag
gtgggccacgtcgtgtgcgcgccgtgccgcgacacgctggcgccggcgggcaggtgctac
gtctgccgcgtcgccgtcgccggcggcgagtaccggcgctgctacgcgctggagcgcctg
gtggacgccatccgcgtcgcgtgcccgcacgccgcccacggctgcgccgccaggccggcc
taccacgacgtcgaggcgcaccgcctcgcgtgcccgcacgggccttgccactgccccggc
gagcgctgcggcttcgtcggctcgaccgccgcgctcctcgaccacttcgccgccacgcac
aactggccgtgcaccaccaacgtcagggcccgcgaggtgttcgacgtccgcctccacgac
ggcttcaacttcctcgtcgtcggcggcgcctcgcgccaccacctggtcatgatgaacatg
acgcgggagccgctcggccgcgccatcaccgtgctccgcatacacccgcacgccacgggc
agaatccagtgcgagctctcgctctcgcgccatgtcgtccttggcgacagctggggcctc
tatcgcagccactaccagaagtccgtgttcgacgtaggttgcagcgacctcgccgatgga
ttgccggatgcaaagcagtgcttccagttcgtcgtgccaagatgcgtcgccggagacgac
gacgaaggtggcaccggcatccgaatcaatgtcctaattaccgtcgactag
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