Oryza sativa japonica (Japanese rice) (RefSeq): 4323892
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Entry
4323892 CDS
T01015
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00900
Terpenoid backbone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
4323892
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
osa01006
]
4323892
Enzymes [BR:
osa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
4323892
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
4323892
Prenyltransferases [BR:
osa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
4323892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
4323892
NCBI-ProteinID:
XP_015621770
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All DBs
Position
1:complement(28752067..28755580)
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AA seq
356 aa
AA seq
DB search
MAAAGAGASGPAAETAAATFRRVYGTLKAELLKDPSFDFNDDAIQWLESMLDYNVLGGKL
NRGLAVVESYKILKAASATEPSEEELFLACILGWGIEWLQAYFLVLDDIMDNSQTRRGKP
CWFRLPKVGLIAINDGLVLRSQISRIFRRYFRGKSYYVDLLDLFNEVEIQTTSGQLLDQI
TTNEGRKDLNKYNVHVYRRIVEYKTAYYSFYLPVACALLLFDESLDNYAQVKHILVEMGV
YFQSQDDYLDCFGEPEIIGKIGSDIEDFKCSWLFVQALERADEKQKGVLFENYGKSDPAC
VAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAVRAVLKSFLHKIYKRSK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgggtgcgggggcgagcggaccggcggcggagacagcggccgcgacgttc
cggcgggtgtacggcacactcaaggcagagcttctcaaggacccctccttcgacttcaac
gacgacgccatccaatggctcgagagcatgctggactacaacgtgcttggtggaaaattg
aaccgtggcttggctgttgttgagagctacaaaatactgaaagctgctagcgcaacagaa
ccgagcgaggaggaattgtttcttgcatgcatccttggttggggcatcgaatggcttcag
gcctattttctggttcttgatgatataatggataactcacaaactcgacgaggaaaaccc
tgttggtttaggcttcccaaggtcggcctcatagctataaatgatggactcgtccttcgc
agccaaatttcaaggatctttaggcgctattttcgtggaaaaagttactatgttgatctc
ctagatttattcaatgaggttgaaattcagacaacttcaggccagttattagatcaaatt
acaacaaatgaaggaaggaaagatctgaacaagtataatgtacatgtatataggcgcatt
gtggaatataagacagcttactattcattttatttgccggttgcatgcgcactgctgttg
tttgatgagagtttggacaattatgctcaagtgaagcatatcctagttgagatgggtgtt
tactttcaaagccaggatgattatctggactgttttggtgaaccagaaattattggcaag
ataggaagtgacattgaagatttcaagtgttcttggctatttgttcaagcacttgagcgc
gctgatgagaaacaaaaaggagtcttgtttgaaaattatgggaaatcagatccagcttgt
gttgccaaagtgaaggatctatataacgaacttcatctccagcgggtgttttctgagtat
gaaagggagagctatgaaaagctgatctcagccatcgaagcacaaccgaatgaagcagta
cgagcggttctgaaatcttttctgcacaagatctacaagaggagcaagtag
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