Oryza sativa japonica (Japanese rice) (RefSeq): 4329319
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Entry
4329319 CDS
T01015
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
4329319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4329319
03009 Ribosome biogenesis [BR:
osa03009
]
4329319
Messenger RNA biogenesis [BR:
osa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
4329319
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-60S particles
RNases
4329319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
4329319
NCBI-ProteinID:
XP_015623707
UniProt:
Q6K7C5
Q6K4V8
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All DBs
Position
2:complement(15650173..15655612)
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AA seq
247 aa
AA seq
DB search
MSELANKFLVLHLDGEGGGADDTEEALIQTSSSIKEADAGENALSDTLVLNYDEGSLVSS
SGDYQMPLVWIDLEMTGLDVAKDRILEIACIITDGKLTKQIEGPDLVINQKKDLLDNMDE
WCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVGSSPPLIAGNSVYVDLLFLKNYM
PQLAAIFSHVIVDVSSIMALCIRWYPKERKRTPQKGKKHRAMNDIKESIAELKYYEDNIF
KPQKSKQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttgcgaacaagttcttggttcttcatctagatggtgaaggtggtggagca
gatgatacagaagaagcactgatccaaacatcttccagcatcaaagaggctgatgccggt
gaaaatgcgctgagtgacacgttggtactaaattacgatgaaggatctcttgtatcatca
tctggtgattaccagatgcctttggtgtggatagacttggaaatgactggtttggatgtt
gcaaaggatcggatattggagatagcttgcatcataacggacggtaaacttacaaaacaa
atagagggccctgatttggttataaatcagaagaaagatctgttagataacatggatgaa
tggtgcaaaactcatcatgcagctagtggattgacacagagagtactacagagtacgatt
tcagagcatgacgcagagacacaagtgttagattttgttaagaagcatgttggttcatct
cctccattaatagctgggaattctgtttatgtggatttactatttttgaagaattatatg
ccgcagcttgcagccatcttctctcacgttattgttgatgtgagcagtataatggctttg
tgcatcagatggtaccccaaagaaaggaagcgaactcctcaaaaagggaaaaaacatagg
gcaatgaatgatatcaaagaaagcatcgctgaactgaaatactacgaggacaacattttc
aaacctcaaaaatctaagcagtag
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integrated database retrieval system